Protein

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Genbank accession
YP_009213539.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,66
Protein sequence
MALKLKGSTSGFVGLDAPSVAGNNTLILPENSGSAFQLFANDITAGVTTFTTVTVNRNGDLTVPGTISIGGTLTYEDVTSVDSIGIVTARGLSIFGNTSGLNATGVSTFTDDVTFTGAAANITFDKSTDDLIFDDNAQAKFGTGGDLSIYHDSSHSYVNASGTGALKLLGNNNDDIQIQPRSGYNSARFEPNKAVKLYYDNALRFNTTPSGADVTGTLNVTGVATFSPGGSEVVRIQSGGLNLYNDLSFFGASTHAYWDRSANQFLLNDNTKLSVGSSSDLQIYHDTNNSFIDEVGSGSLKIKGDDVRFENASGTEAVRITSNGRLIKSNGGVGIATDKIRNANFVHIAAPSDDYTNSSADLMDGGGLCLQHTDSLASTGRTYPGIFWTGNTSALGRSRAAILGVTESNNDATGIAFLTKLSAGGLGLYPSDERMRLTNAGRLIIGHTTHLSNGGVEGSLQVIGTGSDDASMNLLRFSNDIHPSFLCFSKSRNTSIGSNTIVQDGDRLGAIIFFGDDGSDFSSSAAEIECEVNGTPGTNDMPGRLIFKTTSDGGSSPAESMRIARDGSHAKIHMNTTESLSNAMLSMQTNGSSGIGIKAGATNSQYHIAFRNPNGEVGSITTSGSNTQFNTSSDYRLKENEVTISDAIFKIKQLKPYTFNFKVDSSVKTDGFFAHEAQEVVPYAVTGERDAEKMQSMDYGKLTPLLTAALQEAIAEIETLKTEVAALKGS
Physico‐chemical
properties
protein length:730 AA
molecular weight: 76786,69970 Da
isoelectric point:4,94473
aromaticity:0,07397
hydropathy:-0,23685

Domains

Domains [InterPro]
DC_0955
STR
3–264
DC_0955 DC_1815 IPR030392
DC_1367
RBD
475–730
DC_1367
IPR030392
CHP
633–685
IPR030392 Coil
YP_009213539.1
1 730
Architecture
STR
STR
RBD
STR 3-264 | STR 342-500 | RBD 501-730
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009213539.1
1 730
Domain Start End Length (AA) Confidence
N-terminal 1 11 11 0,5319
Central domain 12 210 200 0,1745
C-terminal 211 730 519 0,9412
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-11
Central
12-210
C-terminal
211-730

Taxonomy

  Name Taxonomy ID Lineage
Phage Prochlorococcus phage P-TIM68
[NCBI] 		1542477 Uroviricota > Caudoviricetes > Pantevenvirales > Haifavirus > Haifavirus tim68
Host Prochlorococcus sp.
[NCBI] 		1220 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009213539.1 [NCBI]
Genbank nucleotide accession
NC_028955.1 [NCBI]
CDS location
range 32494 -> 34686
strand +
CDS
ATGGCACTTAAATTAAAAGGATCTACATCTGGATTTGTTGGACTTGATGCTCCATCTGTAGCTGGCAATAATACTTTAATATTACCTGAGAATAGTGGAAGTGCTTTTCAACTGTTTGCTAATGATATCACTGCGGGTGTCACTACTTTTACAACAGTAACAGTTAATAGAAATGGAGATCTAACAGTACCAGGCACAATATCAATTGGCGGAACATTAACATATGAAGATGTAACTAGTGTAGATTCAATAGGAATAGTAACAGCAAGAGGGTTAAGTATATTTGGAAACACATCAGGATTAAATGCAACTGGTGTATCTACATTCACTGATGATGTAACTTTTACAGGTGCAGCAGCAAACATAACATTTGATAAATCCACAGATGATTTAATATTTGATGATAATGCTCAAGCAAAATTTGGTACTGGTGGAGATTTATCCATATATCACGATAGTTCTCATTCCTATGTAAATGCGTCTGGAACTGGTGCTTTAAAATTACTTGGTAATAATAATGATGACATTCAAATTCAACCAAGATCAGGATATAACTCTGCAAGATTTGAACCAAATAAAGCGGTAAAATTATATTATGATAATGCTTTAAGATTTAACACCACTCCTTCAGGTGCAGATGTCACTGGAACTCTAAATGTTACTGGTGTTGCAACTTTTTCTCCAGGTGGTAGTGAAGTTGTTCGCATCCAATCTGGTGGTTTAAATTTATATAATGATCTTTCATTTTTTGGAGCTTCAACTCACGCATATTGGGATCGTTCAGCTAACCAATTTTTATTGAATGATAACACAAAACTTTCCGTTGGAAGTAGCTCAGATTTACAAATATATCATGATACAAATAATAGTTTCATTGACGAGGTAGGAAGTGGTTCTTTAAAAATAAAGGGTGATGATGTAAGATTTGAGAATGCATCAGGAACAGAAGCAGTTCGCATCACAAGTAATGGTAGATTAATCAAAAGTAATGGTGGTGTTGGTATTGCAACTGATAAAATTCGTAATGCTAATTTTGTCCATATTGCTGCACCTTCAGATGATTATACTAATTCAAGTGCTGATTTAATGGATGGTGGTGGTCTATGTCTTCAACATACTGATTCACTTGCTAGTACTGGTAGAACTTATCCAGGAATTTTCTGGACTGGAAATACTTCTGCTTTAGGAAGATCAAGAGCAGCTATTTTAGGTGTAACTGAGTCTAATAATGATGCAACTGGTATTGCATTTCTTACTAAATTAAGTGCAGGAGGACTTGGACTTTATCCTAGTGATGAGAGAATGCGTCTCACAAATGCTGGTAGATTAATTATTGGTCATACAACTCATTTATCTAATGGTGGAGTTGAGGGTTCCTTACAAGTAATTGGTACAGGTTCAGATGATGCATCTATGAATTTACTTAGATTTAGTAATGATATACATCCTTCATTTCTTTGTTTTTCAAAAAGTCGTAATACCTCTATAGGTTCAAATACAATTGTTCAAGATGGTGATCGTTTAGGTGCTATTATATTTTTTGGTGATGATGGAAGTGATTTTTCTAGCAGTGCTGCTGAAATAGAATGTGAGGTCAATGGAACTCCTGGAACTAATGATATGCCAGGAAGACTTATTTTTAAAACAACATCTGATGGAGGGTCTTCACCAGCAGAAAGCATGCGTATAGCTAGGGATGGTTCACATGCTAAAATACATATGAATACCACTGAAAGTTTGTCAAATGCAATGCTTTCAATGCAAACAAATGGATCTTCTGGTATTGGAATCAAAGCTGGTGCTACAAATAGTCAATATCATATTGCTTTTAGAAACCCAAATGGAGAAGTAGGAAGTATAACCACTTCTGGATCAAACACACAATTCAATACCTCTTCAGATTACAGATTAAAAGAAAATGAAGTTACAATATCTGATGCAATTTTTAAAATAAAACAATTAAAACCTTATACATTTAATTTTAAAGTTGATTCAAGTGTAAAAACTGATGGTTTCTTTGCTCATGAGGCACAGGAAGTTGTTCCTTATGCTGTTACAGGTGAGAGGGATGCTGAAAAGATGCAGTCAATGGATTATGGAAAACTCACTCCTCTTCTTACTGCAGCTCTACAAGAGGCAATTGCTGAGATTGAAACTCTTAAAACAGAAGTCGCTGCCCTTAAGGGTTCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
57c560f5c9480b17675ae2fadfa06ab91a6cc24e5cca04fbad04ca3f76097916
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6858
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50