Protein

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Genbank accession
WID30623.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MSQKYSPSIPPQEEEELLPFLNEEFVRVGQTLNDLADGYWGVSMEPPKKLKPGTVKYFAPGVVGPVSGIYHYDLDNQWRLAGTKPKDLPGDFILFTPQNNHQPMGTCAYRMNTAKDEVWITMLMSGGNYTNGATVLDLPQAYWPPAELFIPAYSSIIPAQSTITYPPPSDPNAPPLDQVFDVLNRATIQTGVVNQAMFKITANGRVLIQGIPQGAVFGGTFTFPLVVTP
Physico‐chemical
properties
protein length:229 AA
molecular weight: 25148,41750 Da
isoelectric point:4,84606
aromaticity:0,10917
hydropathy:-0,18079

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage HMGUpa2
[NCBI] 		3028474 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa DSM 50071
[NCBI] 		1123015 Pseudomonadota > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas > Pseudomonas aeruginosa

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WID30623.1 [NCBI]
Genbank nucleotide accession
OQ338181.1 [NCBI]
CDS location
range 33305 -> 33994
strand -
CDS
ATGAGTCAAAAGTACAGCCCTTCGATTCCACCACAGGAAGAGGAGGAACTGCTGCCCTTCCTTAATGAAGAATTCGTTAGGGTTGGACAGACTCTTAATGACCTAGCTGACGGCTACTGGGGGGTCTCTATGGAGCCCCCTAAGAAGCTCAAGCCAGGGACTGTAAAGTATTTTGCCCCCGGAGTGGTAGGTCCAGTATCCGGCATCTATCATTACGACTTGGATAACCAATGGAGACTCGCAGGTACTAAACCCAAGGACCTGCCGGGGGATTTTATCCTATTTACCCCACAGAACAACCATCAGCCGATGGGTACCTGTGCCTATAGGATGAACACTGCTAAGGATGAGGTATGGATAACCATGCTTATGTCCGGTGGTAACTACACTAACGGGGCTACTGTCCTGGATCTACCCCAGGCGTATTGGCCTCCTGCTGAGTTGTTTATCCCGGCCTATTCCAGCATCATCCCAGCGCAGAGCACTATTACTTATCCACCTCCGTCTGACCCTAACGCACCTCCGTTGGATCAAGTCTTTGATGTTCTCAACAGGGCTACTATTCAGACTGGGGTGGTTAACCAAGCAATGTTTAAGATCACAGCTAATGGCCGTGTTCTAATCCAAGGAATTCCCCAAGGAGCAGTCTTCGGGGGTACATTCACATTCCCCCTGGTGGTGACTCCATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
cdae12363da9a6a171a7901cdd24cdea55a064a29841a9c0e555deda0e560942
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7887
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Metagenomic analyses of single phages and phage cocktails reveal contamination with temperate phages and bacterial DNA Peng,X. 2024-09-12 — GenBank