Protein

View in Explore
Genbank accession
WVH05471.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,60
Protein sequence
MGLVSQSVKNLKGGISQQPDILRFSNQGALQVNGWSSETQGLQKRPPTTFTKRLQNKGFLGAKPLVHLINRDAQEQYYVGFSGTGLAVWDLKGNNYTVRGYNGYANCANPRTDLRLITVADYTFVVNRNVVCQMGSTLTNAAYPRLDGRALINVRGGQYGRTLSITINGDGTGSSPQASIKMPNGSAEKVPAGDPYAGMNQVDMTDASWIAGELAAQLQRNLGPSGWSFQAGTGWILITAPANDNVRQIATKDGYADQLLSGFIYQVQTFTKLPANAPPGYLVEITGESARSGDNYWVQYDASGKVWKETAKPKIIAGFNNATLPHALVRAADGQFDWTPLTWDGRNAGDDDTNPMPSFIGSSINDVFFFRNRLGFLSGENVVMSRTSKYFNFFPSSVATLSDDDPIDVAISHNRISILKYAVPFSEQLLLWSDQAQFVLSSNGILSSKTIELDLTTEFDVSDGARPYGIGRGVYFAAPRASFTSLKRYYAIQDVSNVKSAEDVSAHVPSYIVNTVHAIHGSGTENFVSVLSDGAPNRVYIYKFLYLDEVLQQQSFSHWEFGGNTTVLAAACIGSYYYLMLDRPEGLCLERIEFTQHTIDFSIEPYRCYMDMKKVVTLGAYNPDTNLTSFDVRTAYGGTPDPDAVFFLIDQQGVLQEFSSTNWATNPYISFQGNRAGEQMVIGKQYQFQYEFSKFLIKQTADDGSTSTEDIGRLQLRRAWLNYEESGAFEINVNNGSSEFIYSMTGGRLGIAKTLGELSVGTGQFKFPVTGNAVNQRVTITSDNPNPLNVIGCGWEGNYIRRSSGI
Physico‐chemical
properties
protein length:806 AA
molecular weight: 88601,04240 Da
isoelectric point:5,58087
aromaticity:0,11414
hydropathy:-0,27667

Domains

Domains [InterPro]
IPR058003
TTP
1–806
IPR058003
WVH05471.1
1 806
Architecture
TTP
TTP 1-806
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WVH05471.1
1 806
Domain Start End Length (AA) Confidence
N-terminal 1 143 143 0,9914
Central domain 144 342 200 0,2766
C-terminal 343 806 463 0,1476
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-143
Central
144-342
C-terminal
343-806

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage Athelas
[NCBI] 		3111806 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas sp.
[NCBI] 		306 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WVH05471.1 [NCBI]
Genbank nucleotide accession
OR997970 [NCBI]
CDS location
range 27612 -> 30032
strand +
CDS
ATGGGACTCGTTTCGCAATCCGTCAAGAACCTCAAAGGAGGTATCTCGCAGCAACCGGACATCCTTCGGTTCAGCAACCAAGGCGCTCTGCAAGTCAATGGCTGGTCGTCCGAGACCCAAGGACTTCAGAAGCGTCCACCAACCACCTTCACCAAGCGTCTCCAGAACAAGGGGTTCCTCGGGGCCAAGCCTCTGGTTCATCTCATCAACCGGGATGCCCAAGAGCAATACTATGTGGGCTTCTCTGGGACTGGTCTTGCAGTCTGGGACTTGAAGGGCAACAACTACACCGTGCGTGGCTACAACGGTTACGCCAACTGCGCCAATCCTCGCACCGACCTGCGCCTCATCACCGTGGCCGACTACACCTTCGTGGTCAACCGTAACGTCGTCTGCCAGATGGGATCGACCCTGACCAATGCGGCCTACCCAAGGCTGGACGGTCGGGCGCTCATCAACGTGCGTGGTGGTCAGTATGGCCGAACCCTGTCGATCACAATCAACGGTGACGGCACTGGGTCGAGTCCTCAAGCGTCCATTAAGATGCCCAACGGTTCCGCCGAGAAGGTGCCTGCTGGTGACCCATACGCTGGCATGAACCAAGTTGATATGACTGACGCATCGTGGATTGCTGGGGAACTCGCTGCCCAACTACAGCGCAACCTCGGGCCTTCTGGGTGGTCGTTCCAAGCAGGCACCGGGTGGATTCTCATCACGGCCCCGGCCAACGATAACGTCCGTCAGATCGCAACCAAGGATGGCTACGCTGACCAGTTGCTCAGTGGGTTCATCTATCAGGTTCAGACCTTCACGAAGCTCCCTGCGAACGCCCCACCGGGTTACCTCGTGGAGATCACTGGTGAGTCTGCCCGCTCGGGTGACAACTACTGGGTTCAATACGACGCCTCTGGGAAGGTCTGGAAGGAAACAGCGAAGCCCAAGATCATCGCAGGGTTCAACAACGCAACGCTCCCACACGCGCTCGTGAGGGCCGCTGACGGGCAGTTCGACTGGACACCTCTGACGTGGGATGGACGCAACGCTGGCGACGATGACACGAACCCAATGCCGTCCTTCATCGGTTCCTCGATCAACGACGTGTTCTTCTTCAGGAACCGTCTGGGCTTCCTCTCGGGCGAGAACGTGGTCATGTCGCGTACCTCGAAGTATTTCAACTTCTTCCCGAGCAGCGTGGCGACCCTGAGCGATGACGACCCGATTGACGTGGCTATCTCGCACAACCGTATCTCGATCCTGAAGTACGCTGTGCCGTTCTCTGAGCAGCTCCTGCTGTGGAGCGATCAGGCTCAGTTCGTCCTGTCGAGCAACGGCATCCTGTCGAGCAAGACCATCGAGCTGGACTTGACCACTGAGTTCGACGTGAGTGATGGAGCACGGCCCTATGGGATCGGTCGCGGGGTTTACTTCGCAGCACCTCGGGCATCCTTCACGAGCCTCAAGCGGTACTACGCGATTCAGGACGTGTCCAACGTGAAGTCCGCTGAGGATGTCTCTGCGCACGTTCCGAGCTACATCGTGAACACCGTCCATGCAATCCATGGGTCGGGCACTGAGAACTTCGTGAGCGTCCTCTCAGACGGTGCCCCTAACCGGGTCTACATCTACAAGTTCCTGTATCTCGATGAGGTGCTCCAGCAGCAGTCCTTCAGTCACTGGGAGTTCGGTGGCAACACCACTGTTCTTGCAGCGGCCTGCATTGGCTCCTACTACTACCTGATGCTCGACCGTCCAGAGGGCCTGTGCCTTGAGCGTATCGAGTTCACCCAGCACACCATCGACTTCTCCATTGAGCCTTATCGCTGCTACATGGACATGAAGAAGGTCGTGACCCTCGGTGCGTACAATCCAGACACCAACCTGACGAGCTTCGACGTTCGGACGGCCTATGGTGGAACGCCTGACCCTGATGCGGTCTTCTTCTTGATCGACCAGCAGGGCGTCCTTCAGGAGTTCTCATCGACCAACTGGGCGACCAACCCGTACATCTCCTTCCAAGGCAACCGCGCTGGCGAGCAGATGGTCATCGGGAAGCAGTACCAGTTCCAATACGAGTTCTCCAAGTTCCTCATTAAGCAAACCGCTGACGATGGGTCTACCTCGACCGAGGACATTGGACGCTTGCAGCTTCGTCGCGCATGGCTGAACTACGAGGAATCTGGTGCCTTCGAGATCAACGTCAACAATGGCTCCAGCGAGTTCATCTACTCGATGACTGGCGGGCGTCTGGGCATCGCAAAGACCCTCGGAGAACTCTCTGTGGGCACCGGCCAGTTCAAGTTCCCTGTGACGGGCAACGCGGTCAACCAACGAGTAACCATCACCAGTGACAACCCGAACCCACTAAACGTGATCGGCTGTGGCTGGGAAGGTAACTACATTCGCCGGTCTTCCGGTATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c5756d811aee2b1e13cc8cc851f80facd7905b0a24e9e832865037d5514c9112
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3115
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Seed coating with phages for sustainable plant biocontrol of plant pathogens (of the genera of Pseudomonas, Xanthomonas and Agrobacterium) and influence of the seed coat mucilage Erdrich,S.H., Schurr,U., Frunzke,J. and Arsova,B. 2024-06 — GenBank