Protein

View in Explore
Genbank accession
WPJ69568.1 [GenBank]
Protein name
tail fiber
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MADYKLSELNSIDTIRSDDLLHVRVKKRPEMLGDEDRRMTYQDFLASFKLERFVQIAGSTMTGDLGIVKLLYGGKAVFDPTGSSEITVGDVLKTFKINANGLKLTIADASRSATVYHTLNKPSPNELGMRTNEENDARYARLAVNNTFRGTQAILSDNEALIVKNITQDMPLYIRGQDVDGTNRWYLGNDNRGTDNLVIKNVKSGAYLALLDNLISVNKSIQITGQVQPSDWANLDSRYFTQTAANQRFAQLAGNNTFSGSNIFTNFVIKKNANAITIQNVDTTAALYIQARKSDGTNKWYIGNDGDENIVNIYNYLAKTQISLGNTITMSRTVQIGGQVQPSDWANIDSRYIPAATLSSLAKINVANTFTNVQTIVSNNEGLVLRNLTQGQPQYIRGVDTANVSRWWLGVGTANSNVVTLSNSFSGTQISLEPTLVSMNKNLYINGQVQPQNWSNLDARYFVKTQLLNQSLMTASVDNLGNPSAFNLGYSGFVRNNNVTSGLKELAIHVAHSSKTAAHARGISFVYGSNGLATFTYAYDGNGDYAGEAQLYTTDFKPTPSEIGAYTKAETDQKIATAISDSTDLNKIYPVGIVTWFNSNVDPNTALPGLTWTYLNNGVGRTIRIAAANGSDVATTGGSDSVTLAVGNLPSHTHSFSATTSSFDYGTKNTNGTGAHTHSVSGTAATSGQHAHRISQGDNANVSSGRVASSNSRQTHVGWTENDGAHTHSVSGTAASAGDHAHSVGIGAHSHTVSGNTGGTGSGSAFSVTNQFYKLMAWVRTA
Physico‐chemical
properties
protein length:782 AA
molecular weight: 84107,04220 Da
isoelectric point:7,83125
aromaticity:0,08056
hydropathy:-0,33645

Domains

Domains [InterPro]
DC_1566
STR
60–782
DC_1566
G3DSA:6.20.80.10
STR
158–219
G3DSA:6.20.80.10 G3DSA:6.20.80.10 IPR048388 IPR051934
IPR048388
ATT
159–248
IPR048388 IPR048388 G3DSA:6.20.80.10 IPR005003 IPR005003 IPR005003 IPR005003
WPJ69568.1
1 782
Architecture
STR
ATT
STR
ATT
STR
ATT
STR
STR 60-158 | ATT 159-248 | STR 249-274 | ATT 275-355 | STR 356-380 | ATT 381-466 | STR 467-782
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WPJ69568.1
1 782
Domain Start End Length (AA) Confidence
N-terminal 1 65 65 0,9942
Central domain 66 264 200 0,1960
C-terminal 265 782 517 0,8013
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-65
Central
66-264
C-terminal
265-782

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoM_ULIM9
[NCBI] 		2997403 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia sp.
[NCBI] 		1884818 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WPJ69568.1 [NCBI]
Genbank nucleotide accession
OQ850288.1 [NCBI]
CDS location
range 43110 -> 45458
strand -
CDS
ATGGCAGACTACAAGTTGAGTGAATTAAACTCAATCGACACAATTCGTTCAGACGACCTTCTTCATGTCAGGGTTAAAAAGAGACCTGAAATGCTGGGTGATGAAGACCGTCGAATGACCTATCAAGATTTCTTAGCATCTTTTAAACTTGAAAGATTTGTTCAGATTGCTGGTAGCACTATGACGGGTGACTTAGGAATTGTTAAGCTACTTTACGGTGGCAAGGCTGTATTCGACCCTACAGGCTCTTCTGAGATTACTGTTGGGGATGTTTTAAAGACTTTTAAAATCAACGCAAACGGCCTTAAACTAACTATTGCAGATGCTTCAAGGTCAGCAACTGTCTATCATACTCTGAATAAGCCAAGTCCTAATGAACTTGGGATGAGAACTAATGAAGAGAATGATGCAAGGTATGCAAGACTAGCTGTAAATAACACCTTTAGAGGTACTCAAGCTATTCTCTCTGACAATGAAGCTCTTATTGTTAAAAATATCACACAGGATATGCCACTCTATATTCGTGGTCAAGATGTAGATGGCACTAACAGGTGGTATCTAGGTAATGATAATAGAGGTACAGACAATCTTGTTATCAAAAATGTCAAATCCGGTGCGTATTTAGCTCTTTTGGATAACCTAATTTCTGTGAACAAATCTATCCAGATTACTGGTCAAGTTCAACCATCTGATTGGGCTAACTTAGATTCTAGATACTTTACTCAGACAGCAGCTAATCAGAGATTTGCGCAGTTAGCTGGCAATAACACATTTAGTGGTTCTAATATTTTCACTAATTTTGTTATTAAGAAGAATGCTAATGCTATTACTATTCAAAATGTAGATACAACTGCGGCTTTGTATATCCAAGCAAGGAAATCAGATGGAACTAATAAGTGGTACATTGGTAATGATGGTGATGAAAACATTGTAAACATCTATAACTATTTAGCAAAAACACAAATCTCATTAGGTAACACCATTACCATGAGCAGAACAGTCCAAATTGGAGGTCAAGTTCAACCTTCTGATTGGGCTAATATCGACTCTAGATACATTCCAGCAGCTACTTTGAGTAGTCTTGCTAAGATTAATGTGGCAAACACTTTCACGAATGTGCAGACTATTGTATCTAACAATGAAGGCCTAGTATTGAGGAACTTAACACAGGGACAGCCACAATATATCCGTGGTGTGGATACTGCGAACGTATCTAGGTGGTGGCTGGGCGTAGGAACTGCTAATTCTAACGTGGTAACCTTGAGCAACAGCTTTTCAGGCACTCAAATTTCCCTAGAGCCAACATTGGTTAGTATGAATAAGAATCTGTATATTAATGGGCAGGTTCAACCACAAAATTGGTCTAACTTAGATGCTAGATACTTTGTTAAGACTCAGTTATTAAATCAATCTTTGATGACTGCATCTGTAGATAATCTTGGAAACCCTTCAGCATTTAATCTTGGGTATTCAGGTTTTGTCAGAAACAACAATGTGACTAGTGGTCTGAAAGAGTTGGCAATTCATGTTGCTCACTCTAGTAAGACTGCTGCACACGCAAGGGGTATCTCTTTTGTATACGGTTCAAACGGTTTGGCAACATTCACCTATGCCTATGACGGAAATGGTGACTATGCCGGAGAGGCACAGCTTTACACAACTGATTTTAAACCAACTCCTTCAGAGATTGGTGCATATACTAAAGCAGAAACTGACCAGAAAATTGCAACAGCAATTAGTGACTCTACAGACCTTAATAAAATCTATCCAGTAGGTATTGTAACGTGGTTTAACAGCAATGTTGACCCTAATACAGCACTTCCTGGGTTAACTTGGACTTACCTGAACAATGGTGTTGGTAGAACTATCAGAATCGCAGCAGCAAACGGTTCAGATGTTGCTACAACAGGCGGCTCAGATTCTGTGACGTTAGCTGTTGGTAACTTACCATCACATACCCATAGTTTCTCTGCTACCACTTCATCTTTTGATTATGGTACGAAGAACACTAATGGTACTGGTGCACACACTCACTCAGTTAGTGGTACTGCTGCAACTTCTGGGCAACACGCACACAGAATTTCACAGGGTGACAACGCTAACGTTTCATCAGGTAGAGTCGCGTCTTCAAACTCTAGACAGACCCATGTTGGTTGGACTGAAAATGATGGTGCGCACACTCACTCAGTCAGTGGTACTGCTGCATCTGCTGGCGACCATGCTCACTCTGTAGGTATTGGTGCTCACAGTCACACAGTTAGTGGTAACACTGGTGGTACAGGTTCTGGTTCAGCATTTAGTGTTACTAACCAGTTCTACAAGTTAATGGCTTGGGTGAGAACTGCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e06a4bce9d72266d3b585d683a7deabcabf336a5a14a71ff3b65c8d57f132396
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6889
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
In Vitro Effect on Piglet Gut Microbiota and In Vivo Assessment of Newly Isolated Bacteriophages against F18 Enterotoxigenic Escherichia coli (ETEC) Navez,M., Antoine,C., Lafor,F., Goya-Jorge,E., Douny,C., Scippo,M.L., Vermeersch,M., Duprez,J.N., Daube,G., Mainil,J., Taminiau,B., Delcenserie,V. and Thiry,D. 2023 37243139 GenBank