Protein

View in Explore
Genbank accession
QGZ17698.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,85
TF
Evidence RBPdetect2
Probability 0,90
Protein sequence
MASTFSSDLKLELMATGENAGTWGTKTNTNLNLIQQAIAGFESITISSGSTTALVMSNAAISTARNMIIKFATVTLSGATTVTIPDSIEKFYIFDCTAVTGPTNLTIKTASGTGFTLDAAKIYAAYSDGTNLNEVSLDTLGGTIGTAQIADDAVNNDKVAADAIQSTQLADNAVVTAKISNVNVTTAKIADNAITAAKLERKFTISTSDPSGGNDGDIWFKYST
Physico‐chemical
properties
protein length:224 AA
molecular weight: 23190,62610 Da
isoelectric point:4,48593
aromaticity:0,06250
hydropathy:0,07545

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pelagibacter phage HTVC023P
[NCBI] 		2686455 No lineage information
Host Candidadtus Pelagibacter sp. HTCC1062
[NCBI] 		198252 Pseudomonadota > Alphaproteobacteria > Candidatus Pelagibacterales > Candidatus Pelagibacteraceae > Candidatus Pelagibacter >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QGZ17698.1 [NCBI]
Genbank nucleotide accession
MN698239.1 [NCBI]
CDS location
range 45693 -> 46367
strand +
CDS
ATGGCATCGACATTTTCATCAGATCTTAAACTAGAACTCATGGCTACCGGGGAGAACGCTGGTACATGGGGAACTAAAACAAACACAAATTTAAATTTAATACAACAAGCAATTGCAGGCTTTGAGTCTATTACTATTTCAAGTGGCTCAACAACAGCTTTAGTTATGAGTAATGCAGCAATTTCTACTGCAAGAAATATGATTATAAAGTTTGCAACAGTAACTCTTTCAGGTGCAACTACAGTTACTATACCAGATTCAATTGAAAAATTTTATATATTTGATTGCACAGCTGTTACTGGACCAACAAACCTTACAATCAAAACAGCTTCAGGCACTGGGTTTACTTTAGATGCTGCTAAAATTTATGCAGCCTATTCTGATGGTACAAATTTAAATGAAGTATCACTAGATACTTTAGGAGGTACAATTGGAACTGCACAAATTGCTGACGATGCAGTAAACAACGACAAAGTTGCAGCGGATGCAATTCAATCCACACAACTTGCAGATAATGCTGTAGTAACAGCCAAAATTTCAAACGTAAACGTGACCACGGCCAAAATAGCGGATAATGCAATTACGGCTGCCAAGCTTGAGAGAAAATTTACAATTAGTACAAGTGATCCATCAGGTGGTAATGATGGTGACATTTGGTTTAAATATTCAACATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
aed9397771db225d87dbf18b4b48dcbe3a0dd6f7875ba16c98942b0db2232aee
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8584
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Novel pelagiphages prevail in the ocean Zhang,Z., Qin,F., Chen,F., Chu,X., Luo,H., Zhang,R., Du,S., Tian,Z. and Zhao,Y. 2019 — GenBank