Protein

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Genbank accession
XAV38620.1 [GenBank]
Protein name
minor tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MADYQKIYLRVTGTIGDTPLDEDKFPDRVMATGTAFLKPNIRDGYAENAVGPDGIDELNLPAPIQCEISNGWLTFNGDPFVWLLVSRELWNWNISFPQLRINGVSKKLDPFNFTLEPATPSQLADPLYRGINLAPLIEFVNPETGQKSVKGDRGWGIGEFTVVGDNLILTLDDPLHTQLPPRQIPQIVAATAAKTAAEAARDKSQEYRDAAYGHRQAAEAARAGAETAEDASDAARGIAIGARDQTLIYRNETNVSKDAAAVSEGNALASANSAVTKAGEANASKIAAGTSETNALAYKNAAEAARDIAILNRDQAVLAKDEAVTAKGDAITAKTDAIAAKVAAEAARDAAVGGVVPDDGVTTIKIKDLNVTGAKIDNLTITGGKLADSTVPGSKISNLAITAAKIANGTITATQIADGTITATQIADSGITSVKLNSKIVTAAKIADDTITAGQIAPNAITASELADASVDTAAIVDANVTLAKLAPAAKATGFNYGIWFDTRKVGLGDGLAPMGFRFPVAFKVTKITLYLGTVDGTGTTTVMPKKNATNFANSISITAGNLSNNSAYTQDFAIGDALTFDTTLVGGTPGKSMTALVEGYPL
Physico‐chemical
properties
protein length:603 AA
molecular weight: 62686,71020 Da
isoelectric point:4,87641
aromaticity:0,05804
hydropathy:-0,05887

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhodococcus phage Perlina
[NCBI] 		3149140 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XAV38620.1 [NCBI]
Genbank nucleotide accession
PP782351.1 [NCBI]
CDS location
range 4334 -> 6145
strand +
CDS
ATGGCTGATTACCAGAAGATCTACCTTCGTGTAACCGGCACGATCGGAGACACCCCGCTCGATGAGGATAAGTTTCCTGATCGAGTAATGGCAACTGGCACCGCGTTCTTGAAGCCGAACATTCGTGACGGCTACGCAGAGAACGCGGTCGGACCTGACGGCATTGACGAGTTGAACTTGCCAGCGCCGATTCAGTGCGAAATCTCCAACGGCTGGCTGACGTTCAACGGCGACCCATTCGTCTGGCTACTTGTCTCGCGAGAACTGTGGAACTGGAACATCAGCTTCCCGCAGCTCCGCATCAATGGCGTGTCCAAGAAGCTGGACCCTTTTAACTTCACCCTGGAACCGGCTACGCCAAGCCAGCTCGCTGATCCACTGTACCGTGGCATCAACCTTGCGCCACTGATCGAGTTCGTTAACCCGGAGACGGGCCAGAAGTCAGTCAAGGGTGATCGAGGCTGGGGCATCGGAGAGTTCACCGTTGTCGGGGATAACTTAATCCTGACACTTGATGATCCTCTGCATACGCAACTTCCTCCGCGTCAGATTCCTCAGATCGTCGCGGCAACGGCAGCCAAGACTGCCGCCGAGGCTGCACGAGATAAGTCTCAGGAGTACCGTGACGCTGCGTACGGTCACCGTCAGGCGGCTGAAGCTGCACGCGCCGGTGCCGAGACTGCGGAAGATGCATCCGACGCTGCGCGTGGTATCGCCATTGGCGCAAGGGATCAGACGCTTATCTATCGGAACGAAACCAACGTATCCAAGGATGCAGCGGCAGTTTCGGAAGGCAATGCTCTCGCGTCTGCGAACTCTGCCGTCACAAAGGCTGGCGAGGCAAACGCATCCAAGATCGCGGCAGGTACATCTGAGACGAACGCTCTGGCATACAAGAACGCTGCCGAGGCTGCGCGTGATATTGCTATCCTGAATCGCGATCAGGCCGTCCTCGCAAAGGATGAGGCGGTTACCGCGAAGGGTGATGCGATCACCGCGAAGACGGATGCGATTGCGGCTAAGGTTGCAGCGGAAGCTGCGCGGGATGCTGCGGTCGGCGGCGTGGTGCCCGATGATGGTGTTACTACCATCAAGATCAAAGACCTAAACGTAACTGGCGCGAAGATCGACAACCTCACCATTACTGGTGGCAAGTTGGCCGATAGCACAGTGCCTGGATCGAAGATCAGCAACCTTGCTATCACTGCCGCTAAGATCGCCAACGGCACGATTACCGCTACGCAGATTGCAGACGGCACTATTACTGCTACGCAAATTGCGGACTCTGGAATCACAAGTGTCAAGCTGAACTCGAAGATCGTTACTGCGGCAAAGATTGCAGACGATACGATCACGGCTGGACAGATCGCACCGAACGCTATCACTGCATCAGAACTTGCAGATGCCTCGGTTGATACCGCTGCGATTGTCGATGCCAATGTGACGCTAGCCAAGTTGGCACCGGCGGCTAAGGCTACCGGATTCAACTACGGCATCTGGTTCGACACACGCAAGGTTGGGCTGGGAGATGGTCTTGCTCCGATGGGATTCCGTTTCCCTGTCGCGTTCAAGGTAACCAAGATCACGCTCTATCTGGGAACCGTAGATGGAACTGGTACGACCACAGTCATGCCAAAGAAGAATGCTACGAACTTTGCCAATTCCATTTCGATCACTGCGGGCAACCTATCTAATAACTCCGCCTACACTCAGGACTTTGCTATTGGTGATGCATTAACCTTTGACACAACACTGGTTGGTGGAACGCCCGGTAAGTCCATGACAGCACTGGTGGAAGGATACCCACTGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
a360171b04cbb9ed3e127e740c47fb09ef74abb30ab47036fe45a388f1362061
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6736
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genomic Sequence of Rhodococcus phage Perlina Jaryenneh,J.D., Krishna,R. and Mageeney,C.M. 2024-11-12 — GenBank