Protein

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Genbank accession
YP_009851614.1 [GenBank]
Protein name
EPS depolymerase
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MATTGSGGVVYATKLVDLKTKVVIEVSQLADGAGGGTGDLPVATETTLGGVKVGSGLSVTEDGTLSSTGGGSNVDLTPYSKKADNLSDLTDKGTALSNLGGVVKTDIDGLANFAALRSREPAYEGERVYIKCHTAAALAIYLPEGGGWFIGRKTKQADDGGYVASAGGSWHWQRDKSIEDLYIGDFGGLADGVTDAQPAFQAYINFLFGAYARAKTGGTSAGAGGYSPALTLRFGAGTYFISPGEYNKFGVKLASNSADLAFNPSGYAAASSLRIEGVAVQSGKMIATRIISDKSDAPVFLINHRRVSFHNFIWDGQQTTKVDQYNATSNPTGTNLLVGATQGIFNDTASNKQPFLKNECPGGCYARISCINAVNTGSYTFYLLDTLDSKVEQIFSSITAGPVIQVGWSGQTTGVWDHSTSLEIRNCNFSTMVAPAIWAPRCAQAIMNNCWFEHGTVPFDINNGQWDMGMICIEDCRKNPHMWYSKTTCITLSVPTGNDFDRSSPTSGTWASYPKNPDGSDITAWTGGYDQGYWLMMSYGAYFDCPVVYQWGRGYLRGTNNTDNILWVNVGSFRNPTNGGLWRVRILGGSFYNTSSTQTMLTDNLQGEAVINIGRGTGNVPKVSWYTEGAGPLAAVTSTIYPQYQTQSSNDIIPAVWIPIRARCGEFTIFVEGTGLTRKEAGIPAAFTPSGVSQAANPGLNQIPGRFAFHTGEAGFGAKGDVAAIQSRSQASGTVPVDTSKPRQWLRVNINGIEYAMPYYAYTPVITTQPTAQTVATGGTLTLTTAANDAARYQWQKSTDSGSTWTDISGATAATYTKASVVAGDAGQYRAIIKGQLGAADSTVTTNQATTNAVAVTIT
Physico‐chemical
properties
protein length:859 AA
molecular weight: 91062,43890 Da
isoelectric point:5,98699
aromaticity:0,10128
hydropathy:-0,18568

Domains

Domains [InterPro]
DC_0471
ATT
7–227
DC_0471 DC_1007
IPR012334
STR
182–458
IPR012334 IPR036179
DC_0716
STR
224–765
DC_0716
IPR013783
STR
763–849
IPR013783
YP_009851614.1
1 859
Architecture
ATT
STR
ATT
ATT 7-227 | STR 228-739 | ATT 740-859
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009851614.1
1 859
Domain Start End Length (AA) Confidence
N-terminal 1 194 194 0,9936
Central domain 195 565 372 0,9773
C-terminal 566 859 293 0,8558
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-194
Central
195-565
C-terminal
566-859

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage pEp_SNUABM_01
[NCBI] 		2601643 Uroviricota > Caudoviricetes > Vequintavirinae > Henunavirus SNUABM01 >
Host Erwinia pyrifoliae
[NCBI] 		79967 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009851614.1 [NCBI]
Genbank nucleotide accession
NC_048807 [NCBI]
CDS location
range 62076 -> 64655
strand -
CDS
ATGGCAACTACAGGTTCTGGTGGAGTGGTTTATGCAACAAAGTTGGTCGATTTGAAGACTAAGGTCGTGATTGAAGTCTCCCAGCTTGCAGATGGTGCAGGTGGTGGAACTGGAGATCTCCCGGTTGCAACTGAAACCACACTTGGTGGCGTGAAGGTAGGGTCTGGTCTTTCTGTCACAGAAGACGGAACACTATCCTCCACAGGCGGTGGGTCGAATGTTGACTTGACACCGTACTCCAAGAAGGCAGACAATCTATCCGATCTGACTGACAAAGGCACGGCCCTTTCAAACTTGGGTGGTGTAGTCAAGACAGATATCGACGGACTGGCAAACTTTGCAGCACTTCGCAGTCGAGAACCCGCCTATGAGGGTGAGCGTGTGTACATCAAATGTCACACTGCTGCGGCCCTGGCGATCTACCTACCGGAAGGTGGTGGCTGGTTCATCGGCAGAAAAACAAAACAAGCAGATGATGGCGGATATGTAGCTTCTGCGGGTGGTAGTTGGCACTGGCAAAGAGACAAGAGCATCGAAGACCTCTACATTGGTGACTTCGGTGGACTTGCTGACGGTGTTACCGACGCACAGCCTGCGTTCCAAGCCTACATCAACTTCCTCTTCGGTGCCTACGCAAGAGCTAAGACAGGCGGGACTTCCGCTGGTGCAGGTGGATATTCCCCGGCACTGACACTACGCTTTGGTGCAGGAACCTATTTCATCTCTCCTGGTGAGTATAACAAGTTCGGTGTGAAGCTGGCAAGCAACTCAGCAGACCTTGCATTCAACCCATCAGGCTACGCAGCCGCATCCTCTTTACGCATCGAAGGTGTTGCTGTACAATCAGGCAAGATGATCGCAACACGAATCATCTCTGACAAATCAGACGCGCCTGTTTTCCTGATCAACCACCGTCGTGTTTCTTTCCATAACTTCATCTGGGATGGTCAGCAAACCACAAAAGTGGATCAGTACAACGCAACGTCAAACCCTACAGGCACTAACCTGCTGGTAGGTGCAACACAAGGTATCTTCAACGATACAGCCTCCAACAAACAGCCATTCCTTAAAAACGAATGTCCTGGTGGATGTTACGCTCGAATCTCCTGCATCAACGCAGTGAACACAGGGTCGTACACCTTCTACCTGCTGGATACGTTGGACTCCAAAGTTGAACAGATTTTCAGTTCTATTACTGCTGGCCCGGTTATCCAGGTAGGATGGTCAGGACAGACAACAGGTGTTTGGGATCACTCGACATCTCTTGAGATCAGAAACTGTAACTTCTCAACAATGGTTGCTCCGGCAATTTGGGCACCACGTTGTGCTCAGGCGATCATGAACAACTGCTGGTTCGAACACGGAACCGTTCCTTTTGACATCAACAACGGTCAATGGGATATGGGCATGATCTGCATCGAAGACTGTCGCAAGAACCCGCACATGTGGTATTCTAAGACAACTTGTATCACCCTTTCAGTTCCAACAGGAAATGACTTCGACAGAAGTTCACCGACCAGCGGGACATGGGCAAGTTATCCTAAGAACCCAGACGGATCTGACATCACAGCTTGGACTGGCGGTTACGACCAAGGTTACTGGCTGATGATGAGCTACGGTGCATACTTCGATTGCCCGGTTGTTTATCAATGGGGACGTGGGTATCTGCGTGGCACCAACAACACAGACAACATTTTGTGGGTAAACGTCGGTTCCTTCCGTAACCCTACGAACGGTGGTTTGTGGCGAGTCAGAATCTTAGGTGGTTCTTTCTACAATACCAGTTCAACACAAACCATGTTGACAGACAACCTCCAAGGTGAGGCAGTCATCAATATCGGACGAGGAACAGGTAACGTACCGAAAGTGTCTTGGTACACTGAGGGTGCTGGGCCTCTGGCTGCGGTGACTTCAACAATCTACCCGCAATACCAGACTCAATCTTCGAATGACATCATCCCGGCAGTTTGGATTCCTATCCGAGCGCGTTGTGGTGAGTTCACCATCTTCGTTGAAGGAACTGGCCTGACAAGGAAAGAAGCTGGCATCCCTGCTGCGTTTACACCTTCCGGTGTTTCTCAGGCAGCAAACCCAGGTCTTAACCAGATCCCTGGACGCTTTGCGTTCCATACTGGAGAGGCTGGATTTGGAGCTAAGGGCGATGTCGCTGCCATCCAAAGTCGCTCACAGGCTTCCGGCACAGTTCCGGTGGACACATCAAAACCGCGTCAGTGGCTGCGTGTGAACATCAACGGGATTGAGTATGCAATGCCATACTACGCCTACACCCCTGTGATTACAACACAGCCGACTGCTCAAACAGTGGCAACCGGAGGAACTCTAACACTGACAACCGCAGCGAACGATGCAGCGCGTTACCAGTGGCAGAAGTCTACCGATTCAGGAAGCACTTGGACGGATATCAGCGGAGCAACTGCTGCTACCTACACCAAGGCGTCTGTTGTGGCTGGAGACGCAGGTCAATACCGTGCAATCATCAAGGGTCAACTTGGAGCGGCAGATTCCACTGTCACTACGAACCAGGCGACCACGAATGCTGTAGCGGTGACGATCACCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0f1d7e171b432158f4e26461e95328707e5c0a17bacee23ecccedaa1ffb3c9b6
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2923
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of bacteriophages infecting Erwinia pyrifoliae Kim,S.G. and Park,S.C. 2015-11-24 — GenBank