Protein

View in Explore
Genbank accession
ACY76238.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,54
Protein sequence
MATTEHFYTGNGSTTSFAFTFPYLANVDVKVELDNVLKTENSSGQTNNDYTISNTNIVFNSAPGSGVIIHIYRNTNVDTAQATYAAGSSIRAVDLNNNQTQVLYSTQEAQSQIIRTTDIKDGAVNSTKIENNTIVNADINSSAAIDGSKIQASSGSNSGTMSAANFTKLGGIETGATADQTAAEIRTLVESASDSNVFTDADHTKLNGIESGATADQSVSEIKTLIAGSPLSNTHIAADADIAHSKLADVTSSQVLIGNASNVPTATSLSGDVTLNNAGVVTIANDAVEIGMIGCEQTTITDSDSHLPTSGAVVDYVSSQLAPIGGLEVIANEVSFPNTQPAAGVVISITDAGGVVFNGSGSSTTGRTLGGATVTINNAPTALNSETLVAGAGLMVSSTGSSNIYNYHKLFVKESDVVQLSDDINDFNSRYRIAASAPTSNNDEGDLYFDTAANKMFVYDGSAWGQVTSTGEFKILGIKDNGQAHNGSGPTFNGSNDRFDLFENASAADISQASQLLVVLNGVIQKPNDGSFSGTEEGYYLDGTDGIRFCDPPASGSTLFITKQGSATQINTPADNTITQAKIAVDAVDEQRLQVSNAPTNGYYLQAQSGNTGGLTWAAVPNPDLTQLSASNLTSGTIPDARFPSTLPAVSGANLTGLPPSCTGGGSDEIFWENGQTVTTNYTITNNKNAMSAGPITINNGIAVTIGTGENWTIV
Physico‐chemical
properties
protein length:715 AA
molecular weight: 73877,67670 Da
isoelectric point:4,24374
aromaticity:0,06014
hydropathy:-0,17371

Domains

Domains [InterPro]
DC_1390
STR
6–493
DC_1390
IPR005604
ATT
7–119
IPR005604 DC_1875
ACY76238.1
1 715
Architecture
ATT
STR
ATT 6-119 | STR 120-715
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ACY76238.1
1 715
Domain Start End Length (AA) Confidence
N-terminal 1 359 359 0,9162
Central domain 360 588 230 0,0726
C-terminal 589 715 126 0,5374
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-359
Central
360-588
C-terminal
589-715

Taxonomy

  Name Taxonomy ID Lineage
Phage Tiamatvirus PSSP7
[NCBI] 		268748 No lineage information
Host Prochlorococcus
[NCBI] 		1218 Bacteria > Cyanobacteria > Prochlorales > Prochlorococcaceae >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ACY76238.1 [NCBI]
Genbank nucleotide accession
GU071093.1 [NCBI]
CDS location
range 32094 -> 34241
strand +
CDS
ATGGCGACAACTGAACATTTTTATACAGGCAATGGATCCACCACATCCTTTGCCTTTACATTTCCATACTTAGCGAATGTCGATGTCAAAGTTGAACTCGACAACGTATTAAAAACTGAAAATTCAAGTGGTCAAACAAATAATGACTACACCATTTCTAATACAAATATTGTCTTTAACTCAGCTCCTGGAAGCGGTGTTATAATACATATTTATAGAAATACTAATGTTGACACTGCTCAAGCAACTTATGCAGCGGGATCTTCAATTCGTGCTGTTGATCTAAATAACAACCAAACACAGGTTTTATATTCAACTCAAGAAGCACAGTCCCAAATAATAAGGACAACTGATATAAAAGACGGTGCTGTAAATAGTACCAAAATCGAAAACAATACGATTGTAAATGCTGATATCAATTCGTCAGCAGCAATTGACGGTTCAAAAATACAGGCATCTTCTGGCTCTAATTCCGGAACTATGTCTGCAGCTAATTTCACAAAATTAGGAGGAATTGAAACTGGAGCCACAGCAGATCAAACTGCGGCAGAAATAAGAACTCTTGTAGAAAGTGCTTCCGATAGTAATGTATTTACTGATGCTGATCATACTAAGCTTAATGGCATAGAGAGCGGGGCTACCGCAGATCAGTCAGTATCTGAAATTAAAACTCTTATTGCTGGTTCTCCTTTAAGCAATACACATATAGCTGCTGATGCAGATATAGCTCATAGTAAATTAGCTGACGTAACATCTAGCCAAGTCTTAATTGGTAATGCTAGTAACGTACCAACAGCTACAAGTCTTAGTGGTGACGTAACTTTAAACAACGCGGGTGTGGTGACCATAGCTAATGATGCTGTGGAAATAGGAATGATTGGTTGTGAACAAACAACTATTACTGATAGTGATTCACACCTACCTACTTCTGGAGCTGTCGTTGATTATGTGTCTTCCCAACTAGCACCAATCGGTGGACTAGAAGTTATAGCTAATGAAGTAAGTTTCCCTAATACACAACCAGCAGCTGGTGTAGTTATATCTATTACAGATGCAGGCGGAGTTGTATTTAATGGCTCAGGTTCAAGTACAACTGGACGAACTCTTGGTGGTGCGACAGTAACTATTAATAATGCGCCAACAGCTTTAAATTCAGAAACGTTAGTAGCTGGTGCTGGCTTAATGGTCAGTTCAACAGGTTCAAGTAATATCTATAATTACCATAAATTATTTGTTAAAGAATCTGATGTTGTTCAGTTATCTGACGATATTAATGACTTTAACAGTAGATACAGAATAGCTGCTTCTGCACCAACATCTAATAACGATGAAGGTGACTTATACTTCGACACTGCTGCTAATAAAATGTTTGTGTACGATGGTTCCGCATGGGGTCAGGTTACATCAACAGGTGAATTTAAAATATTAGGTATTAAAGATAACGGACAAGCACACAATGGTAGCGGTCCAACATTTAATGGTAGTAACGATAGATTTGATTTATTTGAAAATGCAAGTGCTGCTGATATTAGTCAAGCATCTCAATTACTTGTAGTTTTAAATGGTGTTATTCAAAAACCTAATGATGGTAGTTTCAGTGGTACTGAAGAAGGATATTATCTAGATGGTACAGACGGAATAAGATTCTGTGACCCACCAGCTAGTGGTTCAACTTTATTTATAACTAAACAAGGTTCAGCTACACAGATAAATACACCAGCTGATAACACAATAACTCAGGCAAAGATAGCCGTAGATGCAGTAGACGAACAAAGACTACAGGTAAGTAATGCTCCTACAAATGGATATTATTTACAAGCTCAATCTGGAAACACAGGCGGATTAACTTGGGCTGCTGTACCTAATCCTGATTTAACTCAGTTAAGTGCAAGCAACCTAACATCTGGAACTATTCCTGATGCAAGATTTCCTTCGACTTTACCAGCAGTAAGTGGAGCTAACTTAACAGGTTTACCTCCTAGTTGTACTGGTGGAGGAAGTGATGAAATTTTCTGGGAGAACGGACAAACAGTTACTACTAACTACACCATTACTAATAACAAGAATGCTATGTCCGCTGGACCTATAACAATTAATAATGGTATCGCCGTAACAATCGGTACTGGAGAAAACTGGACAATCGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a4e2ab6ea4d9874a54629d667d967617a24a230cd2985713e844ee8a345042ee
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6531
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Prochlorococcus phage P-SSP7 Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Koehrsen,M., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Borenstein,D., Chen,Z., Engels,R., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hepburn,T., Howarth,C., Jen,D., Larson,L., Lewis,B., Mehta,T., Park,D., Pearson,M., Richards,J., Rizzolo,K., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., Walk,T., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank