Protein

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Genbank accession

XVB83609.1 [GenBank]

Protein name

tail fiber protein

RBP type

Evidence GenBank

Probability 1,00

TSP

Evidence DepoScope

Probability 1,00

Evidence RBPdetect

Probability 0,90

Evidence RBPdetect2

Probability 0,96

Protein sequence

MADYKLSELNSIGTIRSDDLLHVRVKKRPEMLGDEDRRMTYQDFLASFKLERFVQIAGSTMTGDLGIVKLLYGGKTVFDPTGSSEINIGDVLKTFKINANGLKLTIADASRSATVYHTLNKPSPNELGMRTNEENDARYARLAVTNTFSGTQNIQGDANLLRLRNQNANNAQYIEGVNLDGSARWWVGIGSNGSDEVKLYNNKYNSVLTVASNISVNKSLAITGQVQPSDFSNLDARYFTQTVANQRFAQLAANNTFSGLNTFSTSVSISSNAAAIMLKNKAVDESLFIQAKDVENNNLWYIGKGGANDNITFYDYKGDTSIVLNSSGAAFNKTVKITGQVQPSDWDNIDSRYIPAATLSTIARTNAQNTFKSGQTIVADGQALLLRSATDSPSLYVRGQNQSGTNKWYVGFSTSNVLGLSNEASGTTLTLDSAGINSNKNLNITGQVKPSDFSNLDARYFTQSASDSRYLRIRSTNFNNGNDDKWAKIATVVMPQAASTAAIEVFGGAGYNYGLLDQACKTEIVLRTGNENPKGLNIVAWKNSENNIITDIGSVNTSGDTYDIYCKVGACQVTTTSRVQSSSNASVQLFETPQTFDDAPQGIVKGTIARYYTSMQKPTPSDIGAYTKAETDQKIVQAVSDSTDLNKIYPVGIVTWFNSNVNPNTALPGLTWTYLNNGVGRTIRIAAANGSDVATTGGSDSVTLAVGNLPSHTHSFSATTSSFDYGTKTTNTTGAHTHQFGGYINSFYGDSSHTSFQPGGGAWTQAAGDHSHSVDIGAHSHTVSGNTGSTGSGSAFSVTNQFYKLMAWVRTA

Physico‐chemical properties

protein length:	812 AA
molecular weight:	87297,31360 Da
isoelectric point:	6,84361
aromaticity:	0,08744
hydropathy:	-0,37007

Domains

Domains [InterPro]

DC_0032
ATT
1–265

DC_0032 G3DSA:6.20.80.10 G3DSA:6.20.80.10 SSF88874

G3DSA:6.20.80.10
STR
159–218

G3DSA:6.20.80.10 DC_1993 IPR048388 IPR005003 IPR005003 DC_2042

IPR048388
ATT
159–247

IPR048388 IPR048388 DC_2005 IPR005003 IPR005003

XVB83609.1

1 812

Architecture

ATT

STR

ATT

STR

RBD

ATT 1-265 | STR 266-275 | ATT 276-361 | ATT 380-465 | STR 466-784 | RBD 785-812

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
DC_0032	ATT	DC_0032	1	265	Novel HMM	DC_0032	N-terminal	Low	Positional only	139 proteins / 139 hits
G3DSA:6.20.80.10	STR	G3DSA:6.20.80.10	159	218	Merged direct domain	G3DSA:6.20.80.10	Central	Low	Positional only	37 proteins / 37 hits
IPR048388	ATT	DC_0224	159	247	InterPro cluster	Tail fibre protein gp37, trimerization region	Central	Medium	Text match	404 proteins / 802 hits
DC_1993	STR	DC_1993	243	361	Novel HMM	DC_1993	Central	Low	Positional only	126 proteins / 126 hits
G3DSA:6.20.80.10	STR	G3DSA:6.20.80.10	273	333	Merged direct domain	G3DSA:6.20.80.10	Central	Low	Positional only	37 proteins / 37 hits
IPR048388	ATT	DC_0224	276	356	InterPro cluster	Tail fibre protein gp37, trimerization region	Central	Medium	Text match	404 proteins / 802 hits
G3DSA:6.20.80.10	STR	G3DSA:6.20.80.10	380	440	Merged direct domain	G3DSA:6.20.80.10	Central	Low	Positional only	37 proteins / 37 hits
IPR048388	ATT	DC_0224	382	465	InterPro cluster	Tail fibre protein gp37, trimerization region	Central	Medium	Text match	404 proteins / 802 hits
DC_2005	STR	DC_2005	432	737	Novel HMM	DC_2005	Central	Low	Positional only	76 proteins / 76 hits
SSF88874	STR	SSF88874	644	784	Merged direct domain	SSF88874	Central	Low	Positional only	109 proteins / 109 hits
IPR005003	Unmapped	-	711	720	InterPro	Bacteriophage lambda, Tail fiber protein, repeat-1	-	-	-	-
IPR005003	Unmapped	-	731	742	InterPro	Bacteriophage lambda, Tail fiber protein, repeat-1	-	-	-	-
DC_2042	RBD	DC_2042	745	812	Novel HMM	DC_2042	C-terminal	Low	Positional only	65 proteins / 65 hits
IPR005003	Unmapped	-	767	774	InterPro	Bacteriophage lambda, Tail fiber protein, repeat-1	-	-	-	-
IPR005003	Unmapped	-	776	787	InterPro	Bacteriophage lambda, Tail fiber protein, repeat-1	-	-	-	-

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout

N-terminal

Central

C-terminal

XVB83609.1

1 812

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	515	515	0,4333
Central domain	516	714	200	0,3269
C-terminal	715	812	97	0,9944

Note: Constraints were applied during segmentation.
Fixed 9 C-terminal predictions appearing before Central domain

Legend: N-terminal Central domain C-terminal

3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring

N-terminal
1-515

Central
516-714

C-terminal
715-812

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Salmonella phage P219 [NCBI]	3425684	Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host	Salmonella sp. [NCBI]	599	cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Genbank protein accession

XVB83609.1 [NCBI]

Genbank nucleotide accession

PV659053.1 [NCBI]

CDS location

range 20481 -> 22919
strand +

CDS

ATGGCAGATTACAAGTTGAGTGAATTAAACTCAATCGGTACAATCCGTTCAGATGACCTTCTTCATGTCAGGGTTAAAAAGAGACCTGAAATGCTGGGTGATGAAGACCGTCGAATGACCTATCAAGATTTCTTAGCATCTTTTAAACTTGAAAGATTTGTTCAGATTGCTGGTAGCACTATGACAGGTGACTTAGGAATTGTTAAGTTACTTTATGGTGGTAAGACAGTATTTGACCCAACAGGCTCTTCTGAGATTAATATTGGGGATGTTTTAAAGACTTTTAAAATTAATGCAAATGGTCTTAAACTAACTATTGCAGATGCTTCAAGGTCTGCAACTGTCTATCATACTCTTAATAAGCCAAGTCCTAATGAACTTGGGATGAGAACTAATGAAGAGAATGACGCAAGATATGCAAGACTTGCTGTTACAAACACATTCTCTGGGACTCAGAACATTCAAGGTGATGCTAACTTACTTCGCCTTAGAAACCAAAATGCAAATAATGCACAATATATTGAAGGTGTAAACCTAGATGGTTCGGCTAGATGGTGGGTTGGTATTGGTAGTAATGGCTCTGACGAAGTAAAGCTGTACAATAACAAATACAACTCAGTCTTGACTGTTGCAAGTAATATCTCTGTTAATAAGTCTTTAGCAATCACTGGTCAAGTTCAACCTTCAGATTTCTCTAACTTAGATGCTAGATACTTTACTCAGACAGTTGCTAATCAGAGATTTGCACAGTTAGCTGCTAATAACACTTTTAGTGGTTTAAATACATTCAGTACTAGTGTTAGTATTAGCTCTAATGCTGCTGCTATCATGCTAAAAAATAAAGCTGTTGATGAGTCTTTGTTCATCCAAGCAAAAGATGTTGAAAACAATAACCTGTGGTATATTGGTAAAGGTGGTGCAAATGACAATATCACATTTTATGATTACAAGGGCGACACTTCTATTGTATTAAACTCGTCTGGTGCTGCATTCAACAAGACTGTAAAAATCACTGGTCAAGTCCAACCTTCAGATTGGGATAACATTGACTCTAGATATATTCCGGCAGCAACATTAAGTACGATTGCAAGAACTAATGCACAAAATACTTTTAAATCTGGGCAGACAATTGTAGCAGATGGTCAAGCACTATTGTTAAGAAGTGCAACTGATAGTCCCTCTCTCTATGTTAGAGGCCAAAACCAATCTGGAACTAATAAATGGTATGTTGGATTTAGTACTTCAAATGTTCTTGGATTATCAAATGAAGCCTCTGGCACGACATTGACATTGGATTCAGCAGGTATTAATTCTAATAAGAATTTAAATATCACTGGTCAAGTTAAACCTTCAGATTTCTCTAACTTAGATGCTAGATACTTTACTCAAAGTGCTAGTGATAGTAGATACCTGAGAATCAGAAGTACTAACTTCAATAATGGAAACGATGACAAGTGGGCTAAAATTGCTACTGTTGTTATGCCGCAAGCCGCATCTACTGCGGCGATTGAAGTGTTTGGTGGGGCAGGCTATAACTATGGCTTACTTGACCAAGCTTGTAAAACGGAAATTGTTCTCAGAACAGGGAATGAGAACCCAAAAGGTTTAAATATTGTTGCTTGGAAAAACTCGGAGAATAACATTATTACGGATATCGGCTCTGTGAATACTTCTGGAGACACTTATGATATTTACTGTAAGGTCGGTGCGTGTCAGGTTACTACAACATCAAGAGTTCAATCTTCTAGTAATGCAAGTGTGCAGTTGTTTGAAACCCCACAAACATTTGATGATGCCCCACAAGGTATTGTAAAGGGTACAATTGCAAGATACTACACAAGTATGCAAAAACCAACCCCTTCAGATATCGGTGCATACACTAAAGCTGAAACTGACCAGAAGATTGTACAGGCAGTAAGTGATTCAACAGACCTTAATAAAATCTATCCAGTAGGTATTGTAACGTGGTTTAACAGTAATGTTAACCCTAATACCGCACTTCCTGGATTAACTTGGACGTACCTGAACAATGGTGTTGGTAGAACTATCAGGATTGCAGCAGCGAATGGTTCAGATGTTGCTACAACTGGAGGTTCAGATTCTGTTACATTAGCAGTTGGAAACTTGCCTTCACACACTCATAGTTTCTCTGCGACAACCTCTAGCTTTGACTACGGTACTAAAACCACTAACACTACTGGTGCTCATACTCACCAGTTCGGCGGTTATATCAACTCGTTCTATGGAGACTCCAGTCACACCTCATTTCAGCCTGGAGGTGGTGCGTGGACACAGGCCGCTGGCGACCATTCCCACTCTGTAGATATTGGTGCTCACAGCCACACAGTTAGTGGTAACACTGGTAGTACAGGCTCTGGTTCGGCATTTAGTGTTACTAACCAGTTCTACAAGTTAATGGCTTGGGTGAGAACTGCTTAA

Genome Context

Tertiary structure

PDB ID

ffa523520cbb1604b146e42a94c900765ed9125a3adb6a6db75e1e37dc4b6e9b

ColabFold

Source ColabFold

Method ColabFold

Resolution 0,7674

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

3D Structure with Domain Coloring

Domain Coloring

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence