Protein

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Genbank accession
ABC40466.1 [GenBank]
Protein name
phage tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MGKLSFTFNNIRKDYIQMLVGRKRPSWAPVKRRLVRVPHRAGALLLNTETEERRIDVPLVIKAKKDMADLQKLKEDLADWLYTEQPAELIFDDELDRTYLALIDGSVDLDEIVNRGRGVITFVCPMPYKLGKTNTHKFTQEWSTETTSYFTNKGSVEAPALIEMTVKKPSTFLDVWFGEYPNNRDYFRIGYPLTVEETTVQERERVMWDEMATPIGWTPVTGQFDDMKGTGSFKSRGGYALYCEDYGKDVGFYGAIAKKNIPGGPLQDFEMEAWMTLKSKNIGEMGRVEVLLLDEASNVVARINMNDLYATAEITRAHMKIGNSGTPNSFRKLVDTSGYYSNTFNQFRGRLRIARRGKVWSVYVAKFIDGTEKDGASLVERWIDETGNPMTERKIAQVMIAICKWDNHQPVNEIQIDDLKFWKVNKVPSNAQPYIFDTGDKIVIDTEKSLVTINGKNAINIKEIFSNFPVIIRGDNRIDIMPPDVNATISYRERYR
Physico‐chemical
properties
protein length:496 AA
molecular weight: 56812,25600 Da
isoelectric point:7,59542
aromaticity:0,10282
hydropathy:-0,45121

Domains

Domains [InterPro]
G3DSA:2.40.30.200
ATT
2–131
G3DSA:2.40.30.200 G3DSA:2.60.120.860
IPR006520
Unmapped
6–129
IPR006520 IPR054738
IPR008841
STR
19–124
IPR008841
DC_0259
STR
42–460
DC_0259
ABC40466.1
1 496
Architecture
ATT
STR
RBD
ATT 2-131 | STR 132-460 | RBD 461-495 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ABC40466.1
1 496
Domain Start End Length (AA) Confidence
N-terminal 1 384 384 0,5382
Central domain 385 485 102 0,1072
C-terminal 486 496 10 0,1495
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-384
Central
385-485
C-terminal
486-496

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacillus phage Gamma isolate d'Herelle
[NCBI] 		359962 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ABC40466.1 [NCBI]
Genbank nucleotide accession
DQ289556.1 [NCBI]
CDS location
range 11838 -> 13328
strand +
CDS
TTGGGGAAACTTAGTTTTACTTTTAATAATATTAGAAAAGATTATATTCAAATGCTAGTTGGAAGAAAACGTCCTTCATGGGCTCCAGTAAAAAGAAGATTAGTAAGAGTCCCTCATCGCGCAGGGGCTCTTTTACTTAATACAGAAACGGAGGAACGTCGTATTGACGTTCCTCTTGTTATTAAAGCGAAAAAAGATATGGCAGATTTACAAAAGTTAAAAGAAGATTTAGCGGATTGGTTATATACAGAGCAACCCGCTGAACTTATTTTTGATGATGAGTTAGACAGGACTTATTTAGCATTAATTGATGGTTCTGTCGATTTGGATGAAATAGTCAATAGAGGTAGAGGTGTTATTACTTTTGTTTGTCCAATGCCGTATAAATTAGGGAAAACAAATACTCACAAATTTACGCAAGAGTGGTCTACAGAAACAACTTCTTATTTTACTAATAAAGGAAGTGTAGAAGCTCCAGCGTTAATTGAAATGACGGTGAAAAAACCAAGTACCTTTTTAGATGTATGGTTTGGAGAGTATCCGAATAATCGTGATTATTTCAGAATAGGCTACCCTCTGACTGTGGAAGAAACCACGGTACAAGAACGAGAAAGAGTTATGTGGGATGAAATGGCCACTCCTATAGGATGGACACCCGTTACTGGACAATTCGATGATATGAAAGGAACAGGGAGTTTTAAATCGCGTGGTGGTTATGCGCTGTATTGTGAAGATTACGGAAAAGATGTAGGATTCTACGGTGCTATAGCCAAGAAAAACATTCCGGGCGGCCCATTACAAGACTTTGAAATGGAGGCATGGATGACTTTAAAGTCTAAAAATATAGGTGAAATGGGTCGTGTTGAAGTTCTTCTTCTAGATGAGGCTAGTAATGTGGTAGCCCGCATCAATATGAATGATCTATATGCAACTGCCGAAATTACAAGGGCACATATGAAAATTGGAAATAGCGGAACACCCAATAGTTTTCGAAAATTAGTTGATACAAGTGGGTATTATTCGAATACATTTAACCAATTTCGAGGGCGTTTGCGTATCGCTAGGCGGGGGAAGGTGTGGTCTGTATATGTGGCTAAGTTTATAGATGGTACAGAAAAAGATGGCGCTTCGCTTGTAGAACGTTGGATTGATGAAACAGGAAATCCAATGACAGAACGTAAAATTGCACAAGTTATGATTGCGATTTGCAAGTGGGATAATCACCAGCCTGTTAATGAAATACAAATTGATGATTTGAAATTTTGGAAGGTAAACAAAGTTCCATCTAATGCACAACCATATATCTTTGATACTGGAGATAAAATTGTTATCGATACTGAGAAAAGTCTTGTCACAATCAACGGGAAGAATGCAATCAATATAAAAGAAATCTTTAGTAATTTTCCTGTCATAATACGTGGTGACAATCGTATCGATATTATGCCGCCAGATGTAAACGCAACAATCAGTTATAGGGAGAGATATAGATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
bd9059c09fdd48e69801693780ee2039d4a81aa4d9641e96b7072e991cd4c082
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9070
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50