Protein

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Genbank accession
YP_009847192.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,78
TF
Evidence RBPdetect2
Probability 0,93
Protein sequence
MEDLAMSVESNVNFIPELNDQFPRKNDLIKEGDDHIRLVKKVLKNTLPGFNKALTITADSMNNFDRNVGFETDTVILKGAMRVDGSINVNGKKLTGLATPTADGDAVSWKFVKDLTTAIYNTTWPINSIYFTVDDRNPSVILGFGTWEKFGQGRVPVGTGTGVDVRNESKTFVNSGVGGNYSSVLSIDNLPSHTHQLSLDTTSGGEHKHDGGVAIRASSSQPFGKAVAHEELFSYEHHKYGEDIGTAWTNTVSGHVHSIQGNTVATGSGFGFNTQNPYIGVSMWKRTA
Physico‐chemical
properties
protein length:288 AA
molecular weight: 31253,38380 Da
isoelectric point:6,04712
aromaticity:0,08681
hydropathy:-0,38368

Domains

Domains [InterPro]
DC_0570
ATT
6–69
DC_0570 DC_0154
PTHR19051
Unmapped
111–258
PTHR19051
IPR053827
ATT
120–287
IPR053827
YP_009847192.1
1 288
Architecture
ATT
STR
ATT
ATT 6-69 | STR 85-119 | ATT 120-287 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009847192.1
1 288
Domain Start End Length (AA) Confidence
N-terminal 1 111 111 0,9885
Central domain 112 277 167 0,0023
C-terminal 278 288 10 0,9975
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-111
Central
112-277
C-terminal
278-288

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage LAh_6
[NCBI] 		2591030 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Aeromonas hydrophila
[NCBI] 		644 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009847192.1 [NCBI]
Genbank nucleotide accession
NC_048774 [NCBI]
CDS location
range 13242 -> 14108
strand +
CDS
ATGGAGGATCTGGCTATGTCAGTAGAAAGTAATGTAAATTTTATACCAGAGCTGAATGATCAGTTCCCTCGTAAAAATGATTTGATTAAAGAGGGGGATGATCATATTAGGTTAGTTAAAAAAGTCCTAAAGAACACTCTCCCAGGTTTTAACAAAGCCTTAACAATAACAGCAGATTCTATGAACAACTTTGATAGAAATGTTGGTTTTGAAACGGATACAGTTATCCTGAAAGGGGCTATGCGTGTTGATGGTTCAATAAATGTTAATGGCAAAAAATTAACAGGTCTGGCGACACCTACTGCGGATGGTGATGCGGTTTCTTGGAAGTTTGTTAAAGATTTGACAACTGCAATCTATAATACTACTTGGCCAATAAACTCAATTTACTTTACCGTTGATGACAGAAACCCATCTGTCATACTGGGATTTGGTACTTGGGAGAAATTTGGACAAGGTAGGGTTCCGGTTGGTACGGGAACTGGTGTGGATGTTAGAAACGAATCAAAGACGTTTGTAAACAGTGGAGTTGGTGGTAATTATTCATCAGTTTTGTCAATAGATAACCTTCCATCTCACACTCACCAACTCAGCTTAGATACAACCTCTGGAGGGGAACACAAGCATGATGGTGGTGTTGCTATACGTGCATCTTCTTCACAACCATTTGGTAAAGCTGTTGCCCATGAAGAATTGTTTTCATATGAACATCATAAATATGGTGAGGATATTGGTACAGCATGGACTAACACTGTATCTGGTCACGTCCACTCTATTCAGGGTAATACTGTGGCAACTGGTAGTGGTTTTGGTTTTAATACTCAGAACCCCTACATAGGTGTAAGCATGTGGAAAAGAACTGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
7994043a37321a57b377590bf671a8f695bcc7473003ad300ebaffc142f84a91
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7192
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Novel bacteriophages capable of disrupting biofilms from clinical strains of Aeromonas hydrophila with intrinsic antibiotic resistance Kabwe,M., Brown,T.L., Speirs,L., Ku,H., Leach,M., Chan,H.T., Petrovski,S., Lock,P. and Tucci,J. 2020-02-14 — GenBank