Protein

View in Explore
Genbank accession
AUR94676.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MGFFMSDINFCNTKEQLNHLGEVVTGKVDGSPTGADIDTSTLPYTGQVRKTLPALEAEYEQSITDKEAEADAAIDEYRLTNKGDYAAGITLENKFEFITYNGESYFATNPPYTTTATTPDNDTGNLFIGGYVSQTQAESIASDVLSDEVSAYTDIVYKASGGNSAVDNMLNESPLASAIGEAIRTNGTLFAKDSAGTPLTLDNFRAFNAIDISAFLTSFDGTLDSTDKVQEAIDGAAGSTAVIFNTTLRIDGSLVIPKGVTLALVNSSFDLIGDIEINGRIESERVRIFNYTGNIEDHVKGFCDNDVIYPEWFGGEQSPDDAPIDCTDGFNDALRYAYESKVYNVLMKGGASKNFPSGPRYYVTSINVPARVWLRGESRDETFIKQIDGTENLPVVTDWSVTGADRVKLGQFQIDCNDNTGSSGVMLGFNPAFVWGIEGWAADLRIRNFDAYGFIARSSVTQIFRLTCDSSSNNSVGLRMEGGSTFVYTYITNNVGASVEFLGSGHKIYGFHTESNNINYLVKWRTGAVGCSIIGSAFVRNSNNPVEGLFVFEENTIRNGFYDFYQTGNNDGSVPTVSDEEYRVYDNVGDVTDYKQGGSQTPIGIIDDGDTTSEQIRIKPSNSTYTYVGTNTLAYFRLPAHNTRSISQEITLFNATSFDIEARPDETDIGESIFYGLTETAKIPARTSVTFRYVDDMIVYSPYIP
Physico‐chemical
properties
protein length:705 AA
molecular weight: 77055,88530 Da
isoelectric point:4,35446
aromaticity:0,11206
hydropathy:-0,28667

Domains

Domains [InterPro]
DC_1405
STR
7–697
DC_1405
Coil
Unmapped
56–76
Coil
AUR94676.1
1 705
Architecture
STR
STR 7-697 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR94676.1
1 705
Domain Start End Length (AA) Confidence
N-terminal 1 227 227 0,9939
Central domain 228 593 367 0,9468
C-terminal 594 705 111 0,9137
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-227
Central
228-593
C-terminal
594-705

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.197.A._10N.286.54.F2
[NCBI] 		1881256 No lineage information
Host Vibrio cyclitrophicus
[NCBI] 		47951 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR94676.1 [NCBI]
Genbank nucleotide accession
MG592566.1 [NCBI]
CDS location
range 24062 -> 26179
strand +
CDS
ATGGGCTTTTTTATGTCTGATATAAATTTTTGCAACACGAAAGAACAACTCAACCATTTAGGTGAGGTTGTCACAGGTAAAGTTGACGGCTCACCGACGGGCGCTGATATAGATACGTCTACACTTCCATATACGGGTCAAGTGCGCAAAACTCTGCCAGCTTTAGAGGCTGAATACGAGCAATCAATCACCGATAAAGAAGCTGAAGCTGACGCGGCTATTGACGAATATCGCTTAACCAATAAAGGTGATTACGCGGCAGGAATCACGCTAGAAAATAAATTTGAGTTCATCACTTACAACGGTGAATCTTACTTTGCAACGAATCCACCATATACAACCACTGCAACTACGCCTGATAATGACACTGGTAATTTGTTTATTGGTGGTTATGTTAGTCAAACTCAAGCTGAAAGTATTGCTAGTGATGTTTTGAGTGATGAAGTTTCAGCATACACAGATATAGTTTACAAGGCTTCAGGTGGAAATTCTGCTGTTGATAATATGCTCAACGAATCACCACTGGCATCCGCTATCGGTGAAGCTATCAGAACAAATGGAACTTTGTTTGCTAAAGATTCTGCTGGAACCCCTTTGACGCTGGATAATTTCAGAGCATTCAACGCAATAGACATCTCCGCATTTTTAACGAGCTTTGATGGAACTTTAGACAGTACAGATAAAGTTCAGGAAGCGATTGATGGTGCTGCTGGATCTACTGCTGTTATTTTTAACACAACTTTAAGAATTGATGGATCACTTGTAATACCTAAAGGAGTAACTTTGGCGCTGGTTAACTCATCGTTTGATCTTATTGGTGATATAGAGATAAACGGAAGGATTGAATCTGAGAGAGTTAGAATTTTTAATTACACAGGAAATATTGAGGATCATGTTAAAGGGTTTTGTGATAATGATGTTATATATCCTGAATGGTTTGGTGGTGAGCAGAGTCCTGATGATGCCCCTATCGATTGCACTGACGGTTTTAATGACGCCCTACGGTACGCATACGAATCAAAGGTTTATAATGTGCTAATGAAGGGTGGGGCATCAAAGAACTTCCCTTCTGGACCTAGGTATTATGTCACATCAATTAATGTGCCGGCTAGAGTATGGTTAAGAGGCGAATCAAGAGATGAAACATTTATAAAGCAGATTGATGGAACGGAAAACCTCCCTGTAGTAACAGACTGGAGCGTTACAGGGGCTGATAGGGTTAAGCTTGGTCAATTTCAAATCGATTGTAATGATAATACTGGTTCGTCTGGAGTTATGCTTGGGTTTAACCCTGCGTTTGTGTGGGGGATTGAGGGCTGGGCAGCAGACCTACGGATAAGGAATTTTGATGCATATGGCTTCATTGCACGCTCTTCTGTAACGCAAATCTTTAGACTGACTTGCGACTCATCATCAAACAACTCAGTAGGCCTCAGAATGGAGGGTGGTTCTACTTTTGTGTACACATACATAACGAACAATGTAGGCGCAAGTGTCGAGTTCCTTGGGTCTGGACACAAAATATATGGGTTCCACACTGAATCAAACAATATAAACTACCTAGTCAAGTGGCGAACAGGGGCTGTCGGTTGTTCTATTATAGGGTCTGCATTCGTAAGGAATAGTAACAACCCCGTAGAAGGCCTCTTTGTTTTTGAGGAGAATACAATAAGAAATGGTTTTTATGATTTTTATCAAACAGGAAATAATGACGGAAGCGTTCCAACTGTAAGCGATGAGGAGTACAGAGTTTACGATAATGTTGGAGATGTGACAGATTACAAGCAGGGAGGAAGCCAGACGCCAATTGGAATTATAGACGATGGAGATACTACTTCCGAGCAAATAAGAATTAAACCAAGCAACTCAACCTATACTTACGTAGGTACGAACACGCTTGCGTACTTCAGATTGCCAGCTCATAACACTAGAAGCATAAGCCAAGAGATAACGCTTTTTAATGCCACTAGTTTTGATATAGAAGCGAGACCTGATGAAACTGATATAGGAGAGTCTATTTTTTATGGACTGACGGAAACTGCAAAGATACCCGCCAGGACGTCTGTAACTTTTAGGTATGTTGATGATATGATCGTCTACTCTCCTTATATCCCGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
97e746b0ec32e07e7cf2e8dfd8dde21c19a0c4726de99b89ce84fe921968d120
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7353
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank