Protein

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Genbank accession
GENB_62e3f217a0c9 [GenBank]
Protein name
receptor binding protein
RBP type
TSP
Evidence RBPdetect
Probability 0,75
Protein sequence
MTIIKPLEFEVLQNLAKKDETPLWDKEVSYKNNEKVQFKGFVWVSASDEDTHEEPDVYFDKWVKFAPINENAFFDDELNTQTKCDKAWSVKLKVDGVFDTLAFLNLDVSKIKIETLDGKIIYEKSMYYKKSRTWWEYFFSKFKVNKEDFVFLPYPINSEILISFEPAKIGCNVGHILIGKKEFAGVTIYPANSTYINYSKTSTNEWGVTNVVTGKKAKYLEFIVAVEKKDFDYYDDLIAGLYNTKALFIGDESELGFKKLTTFGILKDYSAPLEDQDYMQYKLNIQGLI
Physico‐chemical
properties
protein length:289 AA
molecular weight: 33580,90710 Da
isoelectric point:5,08302
aromaticity:0,15571
hydropathy:-0,33737

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
GENB_62e3f217a0c9
1 289
Domain Start End Length (AA) Confidence
N-terminal 1 271 271 0,7586
Central domain 272 278 8 0,0042
C-terminal 279 289 10 0,9877
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-271
Central
272-278
C-terminal
279-289

Taxonomy

  Name Taxonomy ID Lineage
Phage Campylobacter phage CJLB-13
[NCBI] 		2797315 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
MW373745.1_CDS_[187010..187879] [NCBI]
Genbank nucleotide accession
MW373745.1 [NCBI]
CDS location
range 187010 -> 187879
strand +
CDS

  




        

        
      
    
  






  

  
  

    
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Tertiary structure


  



  

    

      
        
          
            
              

                

                  

                    

                      
PDB ID

                      
1018ea474489c0938fffda9f75e02e2e256ea7c3de83b1260362411a62e533db

                    

                    
                      ESMFold
                    
                  

                  

                  

                    

                      Source
                      ESMFold
                    

                    

                      Method
                      ESMFold
                    

                    

                      Resolution
                      0,9389
                    

                    

                      Oligomeric State
                      monomer
                    

                    
                  

                  

                    
                      Download PDB
                    
                  

                  
                  
                  
                

                
                
                

                  

                    
                      
Model Confidence

                      

                        

                          

                          Very high
pLDDT > 90
                        

                        

                          

                          High
90 > pLDDT > 70
                        

                        

                          

                          Low
70 > pLDDT > 50
                        

                        

                          

                          Very low
pLDDT < 50