Protein

View in Explore
Genbank accession
YP_010671477.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,70
Protein sequence
MTYLGNRPNLVARSDYSFTATEGQTVFSGVSNDGRILSIDPYNYDIFINGILILQSDIVFATPSTVTLIDGRNANDNVVIRSYGSTAITKSVSDLQASVGRRVGEIVTMFGSDTTPPPGCLLMNGAAVTSTYPELRAHLITIGRPLNGNGDPLLPDMGGYFMRGWTPGQTVDSGRVFGSTQQDAFQGHRFVVSNVSTTTGIVQAGSNDPNSYGSGSRSTGDPVTDGVNGTPRTASETRPVNITVTYWIKAYNAPVDIATINLSNLTNDVVNLQTTKGLKRNAVTTLSGTFIDWPNLPPAINRLTVIIPTLTLSANQIPILQLGISTGIVTTGYTGVITNLGVSSMSSAVMNTLGLNFISGTSVSTYASVTVVINRVAGSAGASTWMMTVDGTYQSSGNSRGNAQVTLPGELASLRLTTVSGTPTMTGSANVMWEF
Physico‐chemical
properties
protein length:435 AA
molecular weight: 45753,88550 Da
isoelectric point:5,70950
aromaticity:0,06897
hydropathy:0,02851

Domains

Domains [InterPro]
IPR037053
ATT
103–163
IPR037053 DC_1456
SSF88874
STR
104–250
SSF88874
YP_010671477.1
1 435
Architecture
ATT
STR
ATT 103-163 | STR 164-435
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHph_Y65
[NCBI] 		2509785 Uroviricota > Caudoviricetes > Kleczkowskaviridae > Cuauhnahuacvirus Y65 >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010671477.1 [NCBI]
Genbank nucleotide accession
NC_070967.1 [NCBI]
CDS location
range 173406 -> 174713
strand -
CDS
ATGACCTATCTCGGAAATAGACCAAATTTAGTAGCTCGATCTGACTATTCATTTACTGCGACCGAGGGTCAAACTGTATTCAGTGGCGTCTCAAATGACGGCAGAATTTTAAGTATAGATCCTTACAATTACGATATCTTCATCAATGGTATCCTGATTCTCCAGTCAGATATCGTATTCGCTACTCCATCAACTGTTACTTTAATTGATGGTCGAAATGCAAATGACAATGTTGTCATTAGATCATATGGATCAACTGCTATAACTAAGTCAGTATCAGATCTTCAGGCATCTGTTGGACGTAGAGTAGGTGAGATTGTTACTATGTTTGGTAGTGACACGACGCCTCCTCCTGGATGTCTACTGATGAACGGTGCAGCAGTTACGAGTACATATCCTGAACTCAGAGCTCATCTGATTACGATTGGTAGACCCTTAAATGGAAATGGAGATCCTCTCCTTCCCGACATGGGTGGTTACTTCATGCGAGGATGGACTCCTGGTCAGACTGTTGACTCAGGTCGTGTATTTGGATCAACTCAACAGGATGCATTCCAAGGTCATAGATTCGTAGTTAGTAACGTATCGACGACTACAGGTATCGTCCAAGCAGGTTCAAACGACCCTAACTCGTATGGTAGTGGCTCAAGAAGTACAGGAGATCCTGTAACTGATGGTGTTAATGGTACTCCACGTACTGCTAGTGAAACTCGACCTGTTAACATTACTGTTACTTACTGGATCAAAGCTTATAATGCACCAGTTGACATTGCAACAATCAACTTATCAAATCTGACTAATGATGTTGTAAATCTTCAGACTACTAAAGGTCTGAAGAGAAATGCAGTAACAACTCTGTCAGGTACTTTTATTGATTGGCCGAATCTGCCTCCTGCGATTAATAGACTTACTGTTATAATTCCTACATTAACATTAAGTGCTAATCAGATTCCTATTCTCCAATTGGGAATTTCAACTGGTATTGTTACTACAGGCTACACTGGGGTTATTACTAATTTAGGTGTTAGTAGTATGAGCAGTGCTGTTATGAATACACTAGGATTAAATTTTATTAGTGGAACTTCAGTCTCTACTTATGCATCAGTGACTGTAGTCATTAATAGAGTAGCTGGATCGGCAGGTGCTAGTACTTGGATGATGACAGTAGATGGAACTTACCAGAGTAGTGGTAACTCTCGAGGTAATGCTCAAGTCACACTTCCAGGCGAGTTAGCATCACTAAGATTAACTACTGTTAGTGGTACTCCTACGATGACAGGTAGTGCTAATGTCATGTGGGAATTCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
9efce499f0b0dd498bf8236fc626a9af8b1851da316b74a831552841749739f4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7759
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Patterns of diversity and host range of bacteriophage communities associated with bean-nodulatin bacteria Vann Cauwenberghe,J., Santamaria,R.I., Bustos,P., Juarez,S. and Gonzalez,V. 1998-01 — GenBank