Protein

View in Explore
Genbank accession
WCZ56429.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,79
Protein sequence
MALVIHYTRNEDGTFDVKRYRDNPMNFVVNHVPDGVPVRVFIDEIGEDNDVTEDFEALKENATFHIVESAGGGAIKGVMKIFSVVLKPLAKLLSPSVKGASSNLANSQADSPNNSLTDRNNKARPYERSYDICGTVQTIPNNLMSTYKVFNAAGKIVEYGYYDAGRGYLDIHPDGITDGDTRVSDITGTSVAVYAPYTSPNNTSTPQVMVGDPIEQGLYITVESNEVDGVVLKAPNGLGISFSYMSGYPSLSGNVGTIYDPTGGSDFSGVLVPNDTFSLVSAWTNTDVDLSGGGYQVLSVSEGTITFIVPGGLIGRWQEIRPGSFFRGDGEASLQPDNTYEKTLTDWVSINRTEVERIVANIAAANGMYKDNGKSKTLASVTAEIQYQLLDENSVPYGPIYTAQGTVSGRTPDYNGVTIYADLPVVSRVRVRARRVTDLDFNFEGSVVDEITYVNLYGQTRDNTPHYGNRTTVHSMRKQTPRAAEVKQPQLRMIATEMVHKYLGNGVFEDTMTPNTQAVQSLIRLARDPDVGGLNLTVRNMDKLLAVQNEVEAYFGDKQAGEFCYTFDDYKTTMQDIVSTIADAIFCTPYRRGADILLDFERPRMGPEMVFTHRSKAGTSEKWTRTFNDSQVFDSLKFSYIDPKTNVKETITIPETGGLKTETYDSKGIRNYKQAFWAANRRHQKNILKKISVSFSATEEGIFALPNRAVSVVKGSRMATYDGYVTAVNGLTVELSQPVKFTSGDDHSLVLKLRDGGVQSVRVVPGAHDRQVIMTSVPQEAIYTGNSALKTEFSFGNEARHNAQMILVSTVDPGDDRTVKITGFNYDKDFYKFDNVPPFGRAFSNGFDNGFN
Physico‐chemical
properties
protein length:852 AA
molecular weight: 93812,75540 Da
isoelectric point:5,30822
aromaticity:0,09624
hydropathy:-0,36808

Domains

Domains [InterPro]
DC_0118
STR
1–686
DC_0118 DC_0808
NF040662
Unmapped
352–832
NF040662
WCZ56429.1
1 852
Architecture
STR
RBD
STR 1-686 | RBD 703-846 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WCZ56429.1
1 852
Domain Start End Length (AA) Confidence
N-terminal 1 230 230 0,9673
Central domain 231 429 200 0,6641
C-terminal 430 852 422 0,1519
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-230
Central
231-429
C-terminal
430-852

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage Kenya-K2
[NCBI] 		3027608 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica
[NCBI] 		28901 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WCZ56429.1 [NCBI]
Genbank nucleotide accession
OQ291020 [NCBI]
CDS location
range 20286 -> 22844
strand +
CDS
TTGGCGCTAGTAATCCACTATACCCGTAACGAAGACGGCACATTTGACGTTAAACGTTATCGCGATAATCCAATGAACTTCGTCGTGAACCATGTTCCGGACGGGGTTCCGGTACGTGTTTTCATTGACGAAATCGGAGAAGATAACGACGTAACAGAAGACTTCGAAGCACTGAAAGAAAACGCGACTTTCCACATTGTGGAATCTGCCGGTGGCGGCGCTATTAAAGGCGTCATGAAGATTTTTAGCGTTGTCCTTAAACCGCTAGCGAAACTATTATCACCATCCGTGAAAGGGGCGTCATCTAACCTTGCGAACTCGCAGGCGGATTCCCCGAACAACAGTCTCACCGACCGTAACAACAAGGCCCGTCCATACGAGCGTAGCTACGACATCTGCGGAACGGTGCAAACTATCCCAAATAACCTTATGTCTACTTATAAGGTGTTTAACGCCGCTGGTAAAATTGTAGAGTACGGCTATTACGACGCCGGGCGTGGTTACCTCGACATACACCCGGATGGCATAACGGACGGGGATACCCGTGTATCAGATATAACAGGCACGTCGGTTGCGGTGTATGCCCCGTACACATCGCCCAATAACACATCTACACCCCAGGTCATGGTAGGGGACCCCATAGAGCAGGGCCTGTACATTACCGTAGAATCTAACGAAGTCGACGGCGTGGTTCTTAAAGCGCCCAACGGCCTGGGTATTTCTTTCTCTTACATGTCCGGGTATCCGTCTTTGTCCGGAAACGTTGGCACGATATATGACCCAACAGGTGGTTCGGATTTTTCTGGGGTGTTGGTTCCTAATGATACGTTTTCGTTGGTGTCAGCGTGGACAAATACGGACGTCGACTTGTCCGGCGGCGGGTACCAGGTGTTAAGCGTATCTGAAGGGACCATTACCTTTATCGTGCCCGGCGGCCTTATTGGGCGGTGGCAAGAAATAAGACCAGGTTCATTTTTCCGCGGTGACGGAGAGGCGTCGCTGCAACCGGATAATACATACGAGAAAACATTAACCGATTGGGTGTCTATAAACCGCACCGAGGTTGAGCGCATAGTCGCCAATATAGCCGCGGCCAATGGGATGTACAAAGACAACGGCAAGTCAAAAACACTGGCGTCTGTTACCGCCGAGATACAGTACCAGCTACTTGATGAAAATAGCGTTCCTTACGGGCCAATATACACGGCGCAAGGAACCGTGTCCGGGCGTACTCCAGACTACAACGGTGTCACTATTTACGCCGACCTACCGGTCGTGTCGAGGGTGCGTGTGCGGGCCAGACGGGTGACAGACCTTGACTTTAATTTCGAGGGGTCTGTAGTTGATGAGATAACATATGTTAACTTGTACGGGCAAACACGCGATAACACTCCGCACTACGGCAACAGGACTACCGTACACTCAATGCGCAAGCAGACACCACGCGCCGCGGAAGTCAAACAGCCACAGTTACGCATGATTGCCACCGAAATGGTACACAAATACCTTGGTAATGGTGTTTTCGAAGATACGATGACCCCCAATACCCAAGCCGTGCAATCTCTTATCCGCCTGGCCCGTGACCCGGATGTGGGAGGTTTAAACCTGACAGTACGCAACATGGATAAGTTACTTGCCGTGCAGAACGAGGTCGAAGCGTATTTCGGTGACAAACAGGCGGGGGAATTTTGTTACACGTTTGATGACTATAAAACCACTATGCAGGATATAGTTAGTACTATAGCCGACGCTATCTTCTGTACTCCATATAGGCGTGGGGCGGATATCCTTCTCGATTTTGAACGCCCTCGCATGGGTCCTGAGATGGTGTTCACCCACCGAAGCAAGGCCGGTACTTCTGAAAAGTGGACCAGAACATTTAACGATTCTCAGGTTTTTGACAGCCTTAAATTCTCGTACATAGACCCCAAAACAAACGTTAAAGAAACCATAACCATTCCAGAAACCGGAGGCCTTAAAACGGAGACTTATGACTCAAAAGGAATCCGCAATTATAAGCAGGCTTTCTGGGCCGCAAACCGTCGTCATCAGAAGAACATATTGAAGAAGATTTCAGTGTCTTTTAGCGCTACTGAAGAAGGAATCTTTGCCCTGCCAAATCGTGCCGTTAGTGTGGTTAAAGGTTCCCGTATGGCCACCTACGACGGCTACGTAACTGCGGTGAACGGCCTCACCGTAGAGCTTTCACAGCCAGTTAAGTTCACCTCCGGGGATGACCATTCTTTGGTTCTTAAGCTGAGAGACGGTGGCGTCCAAAGTGTTCGCGTTGTTCCTGGTGCACACGACCGACAAGTAATTATGACGTCGGTGCCGCAAGAAGCCATTTACACGGGTAATAGCGCCCTGAAAACTGAATTTTCATTCGGCAACGAAGCAAGGCATAATGCTCAGATGATTCTTGTTTCTACAGTAGACCCTGGTGATGACAGAACAGTCAAAATAACCGGGTTTAACTATGACAAGGATTTCTATAAGTTCGACAACGTACCGCCTTTCGGTCGTGCGTTCTCTAACGGATTCGATAACGGCTTTAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
6df36f2465b57adb0993258edc1a60b0b9cbe709b3b86510f735662c33147fa8
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3049
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Whole genome sequence of Salmonella phage Kenya-K2 Gunathilake,D., Makumi,A., Loignon,S., Trembley,D., Labrie,S., Svitek,N. and Moineau,S. 2024-01-11 — GenBank