Protein

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Genbank accession
YP_009900291.1 [GenBank]
Protein name
tail protein
RBP type
TF
Evidence RBPdetect
Probability 0,78
Protein sequence
MVCKNCNKSVIDPNLRSTISNTGCDCDVHTESDSPEKLVLDETRLSRRVDSNRAMVVSINGKSIMAIVDRFIEYTRCLVRNIITHVVNLDKRVTRLEGTGGDLTPVKLDFDAGYMYTWTMYRIGNTVFVAAEGRQIATSPANEEWTLMPNKVPEGFRPIQSCQVLSFAQTKAQTTVQRQILPDGVVHYLSINGIEANTWVITPSTSWLTNDKYPTN
Physico‐chemical
properties
protein length:216 AA
molecular weight: 24234,34650 Da
isoelectric point:6,81792
aromaticity:0,06944
hydropathy:-0,26435

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactococcus phage phiQ1
[NCBI] 		2488571 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Lactococcus cremoris
[NCBI] 		1359 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009900291.1 [NCBI]
Genbank nucleotide accession
NC_049805 [NCBI]
CDS location
range 12039 -> 12689
strand -
CDS
ATGGTATGTAAAAATTGTAATAAGAGTGTGATTGACCCTAATCTACGCTCTACTATTTCAAATACTGGTTGTGACTGTGATGTTCATACAGAATCAGATAGTCCTGAAAAGTTAGTTCTTGATGAAACTAGATTAAGTCGTCGTGTTGACTCAAACCGTGCAATGGTGGTTTCTATTAATGGTAAATCCATTATGGCTATTGTTGATAGGTTTATTGAATATACTCGCTGTTTAGTTCGTAATATTATCACCCATGTTGTTAATCTGGATAAACGTGTAACTCGTTTAGAAGGCACTGGTGGTGATTTGACTCCAGTCAAACTAGATTTTGACGCTGGTTATATGTACACTTGGACTATGTATCGTATTGGTAATACAGTTTTTGTAGCTGCTGAGGGACGACAAATTGCTACTTCTCCTGCCAACGAAGAATGGACATTAATGCCAAACAAAGTTCCAGAAGGATTTAGACCAATTCAATCTTGTCAAGTACTTAGTTTTGCTCAAACCAAAGCTCAAACAACGGTACAACGTCAAATTTTACCAGATGGTGTTGTTCATTATTTATCAATTAATGGTATTGAAGCAAACACTTGGGTGATTACACCATCAACATCTTGGCTCACTAATGATAAATACCCAACAAATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
90dd249129a948267fa43776701d1765a01d51999262bcccda70309aa981ef91
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7328
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequencing analysis of lytic phage phiQ1 Kimuro,A., Yamasaka,A., Fujino,Y. and Doi,K. 2011 — GenBank