Protein

View in Explore
Genbank accession
QIN96216.1 [GenBank]
Protein name
tail fiber protein host specificity
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,79
Protein sequence
MREFTTIVESVTAPSTDKLWINNGVLKYYDGASWKAFTSSGCGCSIEISKQNTWVINGVDTGKPSKGVNGYNGEDGITPKIGPNGNWWICNTDTGVLASGSNGKPGEAGENGITPHIGSNYNWFIASEDTGVLARGTNGKDGEQGPIGPPGEKGEPGPQGKPGVGARTVFAFKVSSTIPATPTGGSWDPETDVVTYPVGWSGDDTQEGIVWMSHAVFNTDGNLDNGGWSKPIRMTGEDGINGTDGTSIEFIFKLTQNTYTEPTKPDNDPNTTDYVPDGWTDRPQGISIEMQAEWVCTRTKGETAWSDWDGPSLWSKWGADGRDGDGVEYIFQRKNNAIPPARPTETSQEPEFLPEGWTDNPTGVDSNYQWEWVCLRKYKDGLWGEFSNPALWAKYGEDGTNGENGNSIRVMYAKTDGSDETPPVVEDNINPGSIWGTAMPNYTDNEAIWGIQATVSYDNQLVTNWQGPYLITGVNGKNGTPVNYKTYVFRQSDDKPLGPTSNDPENPGNGWVDYPNTSGNWWQCIGSVNGVTGLVTEWSEVLPLNGRDGTAQDGKFTEFRFAKSSTDDAPIINKTIRTPSGWTLTFPTLGEGDIMWMTKAVINPDDTLYSNWEDPVRISGERGPQGNTGPAGQPGAPGSQGVSGIPGVSYELRYSLGIEDDFDATWNSTVASTRNPSSYGWITELPATTEDKPYIWMTQARIKLADNDDTVGSLQGTWSEPFRLSGVNGLDGAPGPAGKKGQVVYPMGVYSNTTSYTTTDTKAPYVYDPSDGNFYVLNAEMTWLGTEQDNRTPSQDFAANGGEYWLKFDSFEAIYAKIGIIANGLIGSAVFNGDYMFSQQGIDESGTATTAYENFGTENFTPNYQVNFATGEVWFGGGKAKINADGSGYLADGKINFTADGKAIGDLFDKQYALGSINIDLPTVPDGSIKNVILPYYVTRVIPKHNFRVASQSDSLIFKLGGVTRYHVGNLNIESLVGTGHGYLRMTGYYSGTEDATGNSITTWLIEDIHFGEATSYP
Physico‐chemical
properties
protein length:1018 AA
molecular weight: 110287,45930 Da
isoelectric point:4,41124
aromaticity:0,11297
hydropathy:-0,57318

Domains

Domains [InterPro]
DC_1486
ATT
1–76
DC_1486 G3DSA:2.60.120.220 G3DSA:1.20.5.320
PTHR24637
Unmapped
66–742
PTHR24637
DC_1486
ATT
69–110
DC_1486 DC_0392
DC_0947
STR
100–607
DC_0947
QIN96216.1
1 1018
Architecture
ATT
STR
STR
ATT 1-150 | STR 151-607 | STR 620-1007 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacteroides phage DAC15
[NCBI] 		2710495 No lineage information
Host Bacteroides thetaiotaomicron
[NCBI] 		818 cellular organisms > Bacteria > Pseudomonadati > FCB group > Bacteroidota/Chlorobiota group > Bacteroidota

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIN96216.1 [NCBI]
Genbank nucleotide accession
MT074136.1 [NCBI]
CDS location
range 16401 -> 19457
strand +
CDS
ATGAGAGAATTTACAACTATAGTAGAGTCAGTTACTGCACCAAGCACTGACAAGTTATGGATTAATAATGGTGTACTGAAGTACTATGATGGTGCTTCATGGAAGGCATTTACTTCCTCTGGTTGTGGTTGCTCTATTGAAATCAGCAAACAAAACACATGGGTTATTAATGGTGTTGATACTGGAAAGCCCTCAAAGGGAGTTAATGGTTACAATGGAGAAGATGGTATTACACCTAAGATTGGGCCTAATGGGAACTGGTGGATATGTAATACAGATACTGGTGTATTAGCATCTGGGTCTAATGGTAAGCCAGGTGAAGCAGGTGAGAATGGTATAACTCCTCACATTGGTAGTAACTATAACTGGTTTATAGCAAGTGAAGATACTGGAGTACTTGCTAGAGGCACAAATGGTAAAGATGGTGAACAAGGACCAATAGGCCCTCCTGGAGAAAAAGGAGAGCCAGGACCACAGGGTAAACCTGGAGTTGGAGCTAGAACTGTATTTGCTTTCAAAGTAAGTTCAACTATCCCTGCAACACCAACTGGTGGTAGTTGGGACCCTGAGACTGATGTAGTCACTTATCCTGTTGGATGGAGTGGTGATGATACTCAGGAAGGTATTGTCTGGATGTCTCATGCTGTATTTAATACAGATGGTAACTTAGATAATGGAGGTTGGAGTAAGCCTATTAGAATGACAGGTGAAGATGGAATCAATGGTACTGATGGTACTAGCATTGAGTTCATATTTAAGCTAACCCAGAACACCTATACTGAGCCTACTAAACCTGATAATGATCCTAATACTACAGACTATGTTCCTGATGGCTGGACAGACCGTCCTCAAGGTATTTCTATAGAGATGCAAGCTGAATGGGTTTGCACTAGAACTAAAGGTGAAACTGCTTGGAGTGACTGGGATGGACCATCACTTTGGTCTAAGTGGGGAGCTGATGGTAGAGATGGTGATGGTGTTGAATACATCTTTCAGAGAAAGAACAATGCTATACCTCCTGCAAGACCTACTGAAACATCACAAGAACCAGAGTTCCTTCCTGAAGGCTGGACTGATAATCCTACTGGTGTAGATTCAAACTATCAATGGGAATGGGTATGTCTCAGAAAGTACAAAGATGGTCTTTGGGGAGAGTTCAGTAACCCTGCTCTTTGGGCTAAGTATGGTGAAGATGGTACTAATGGAGAGAATGGTAACAGTATTAGAGTAATGTATGCTAAGACTGATGGTTCTGATGAAACTCCTCCTGTTGTTGAAGACAACATAAACCCAGGAAGTATATGGGGAACAGCAATGCCTAACTATACTGACAATGAGGCTATTTGGGGTATTCAGGCTACAGTTAGCTATGATAACCAGTTGGTAACTAACTGGCAAGGTCCATACCTGATTACAGGTGTTAATGGTAAGAATGGGACTCCTGTTAACTATAAGACTTATGTATTCAGACAGAGTGATGACAAGCCTCTTGGACCTACAAGCAATGACCCTGAGAACCCAGGAAATGGTTGGGTAGATTACCCTAATACCTCTGGTAATTGGTGGCAGTGTATTGGTTCAGTAAATGGTGTTACTGGTTTAGTAACTGAATGGAGTGAAGTATTACCTTTGAATGGTAGGGATGGTACTGCACAAGATGGTAAGTTCACTGAGTTTAGATTTGCAAAGAGCTCTACTGATGATGCTCCAATCATTAATAAGACTATAAGAACTCCATCAGGTTGGACACTGACATTCCCTACACTGGGAGAAGGTGACATCATGTGGATGACTAAAGCTGTTATTAACCCTGATGATACTCTCTACTCTAATTGGGAAGACCCTGTTAGAATTAGTGGTGAAAGAGGTCCTCAAGGTAATACTGGTCCTGCTGGACAGCCAGGTGCTCCTGGTAGTCAAGGTGTTAGTGGTATCCCAGGTGTATCATATGAACTAAGATACTCATTAGGAATTGAAGATGACTTTGATGCAACATGGAATAGTACAGTAGCTTCTACTAGAAATCCATCTTCTTATGGTTGGATAACTGAGTTACCTGCTACTACAGAAGATAAGCCTTACATCTGGATGACACAGGCTAGAATCAAACTAGCTGATAATGATGATACAGTTGGCTCACTTCAAGGAACATGGTCAGAACCATTCAGATTGAGTGGTGTTAATGGGCTTGATGGTGCACCTGGACCTGCTGGTAAGAAGGGACAAGTAGTATATCCAATGGGTGTTTATAGTAATACTACATCTTATACTACAACTGATACTAAAGCACCTTATGTATATGACCCAAGTGATGGTAACTTCTATGTACTAAATGCTGAGATGACTTGGTTAGGTACAGAGCAGGATAATAGAACTCCTTCACAAGACTTTGCTGCTAATGGTGGTGAGTATTGGTTGAAGTTTGATTCATTTGAAGCTATCTATGCTAAGATTGGTATCATAGCTAATGGTCTTATTGGTAGTGCTGTATTCAATGGTGACTATATGTTTAGTCAACAAGGAATTGATGAAAGTGGTACAGCTACAACAGCTTATGAGAACTTTGGTACTGAGAATTTTACTCCTAATTATCAAGTTAATTTTGCTACTGGTGAAGTTTGGTTTGGAGGAGGTAAAGCAAAAATAAATGCAGATGGTAGTGGGTATCTAGCTGATGGTAAGATTAACTTCACTGCTGATGGTAAGGCTATAGGAGACCTATTTGATAAACAATATGCTCTTGGGTCTATTAATATAGACCTTCCTACTGTCCCTGATGGGAGTATTAAGAATGTGATACTTCCATATTATGTTACTCGTGTTATACCTAAGCATAATTTCAGAGTTGCAAGTCAGTCAGATAGTCTTATATTCAAGCTAGGTGGTGTAACAAGATACCATGTTGGAAATCTCAATATTGAGAGCCTTGTGGGTACAGGGCATGGTTACCTTAGGATGACTGGGTACTATTCTGGAACTGAAGATGCTACTGGAAATAGTATAACCACTTGGTTAATAGAAGACATTCATTTTGGAGAAGCTACAAGTTATCCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
af4a8f3ed50df607cc91b619b5335fd77717b7458731df22d79cc2b271a44d06
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6735
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Bacteroides thetaiotaomicron-infecting bacteriophage isolates inform sequence-based host range predictions Hryckowian,A.J., Merrill,B.D., Porter,N.T., Van Treuren,W., Nelson,E.J., Garlena,R.A., Russell,D.A., Martens,E.C. and Sonnenburg,J.L. 2020 — GenBank