Protein

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Genbank accession
AUM57601.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,68
Protein sequence
MGAGGFRKNTGRNNTTLPYNVGFLNNVQDTETYNVAVYDELQKVSTATNQMFQAIDEIHDEIDVRIKALNAMNLQFDELENRITTEIETAIADIQTQMGNLSTDDIWDNSVQPPVKLESSISGIKTSIEGNDLKIQTVQGIVNQQGEEIALVQTELTSQGQQITDVDGKVTTVQNSLSQYMKLTSYEATWGVNSSVNGQYAGVKLTNNGTNSQFQVTANKFIVGNGTTGNTPFVFENGRARMEFADIKNVNITTAMIANARIQWAQIDNVSITNAQITSLSADKITAGAMSGSNWRLTVGGDFQLGSGSGGNRLWMNGSRIDFYDGSGTLRIRIGTW
Physico‐chemical
properties
protein length:337 AA
molecular weight: 36765,34940 Da
isoelectric point:4,65178
aromaticity:0,07122
hydropathy:-0,36736

Domains

Domains [InterPro]
DC_0177
ATT
1–159
DC_0177 IPR015406
AUM57601.1
1 337
Architecture
ATT
RBD
ATT 1-159 | RBD 174-319 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage LAMP
[NCBI] 		2065191 Uroviricota > Caudoviricetes > Mktvariviridae > Kuravirus > Kuravirus LAMP
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUM57601.1 [NCBI]
Genbank nucleotide accession
MG673519.1 [NCBI]
CDS location
range 19572 -> 20585
strand +
CDS
ATGGGTGCAGGTGGTTTTCGTAAGAACACTGGTCGCAATAACACCACACTCCCGTACAACGTTGGGTTTCTCAATAATGTACAGGACACAGAAACTTATAACGTAGCCGTGTATGATGAGTTACAGAAAGTCAGTACAGCTACTAACCAAATGTTCCAAGCTATTGATGAGATTCACGATGAGATTGATGTTCGTATCAAAGCTCTTAATGCGATGAACTTACAATTTGATGAGCTTGAGAACAGAATTACTACAGAGATAGAAACAGCTATTGCAGATATTCAAACACAGATGGGGAACCTCTCCACTGACGATATTTGGGATAACTCAGTACAACCTCCGGTTAAACTAGAAAGCTCTATCTCTGGTATTAAAACAAGTATTGAAGGTAATGATCTTAAGATACAAACTGTTCAAGGTATTGTTAACCAGCAGGGAGAAGAGATTGCATTAGTCCAGACAGAACTCACTTCTCAAGGACAGCAAATTACTGATGTTGATGGGAAGGTCACTACCGTGCAGAACTCCCTTTCTCAGTATATGAAATTAACTTCGTATGAAGCAACTTGGGGTGTTAACTCTTCTGTTAATGGTCAGTATGCTGGGGTTAAATTAACCAACAACGGAACGAACAGTCAATTCCAAGTAACAGCTAACAAGTTCATCGTTGGTAATGGCACGACAGGTAATACTCCTTTTGTGTTTGAGAACGGAAGAGCTAGAATGGAATTCGCTGATATAAAGAACGTCAACATTACAACTGCTATGATTGCTAATGCTAGGATTCAGTGGGCACAGATTGATAATGTTAGCATAACAAATGCACAAATAACGAGTTTATCCGCTGATAAAATTACAGCTGGGGCTATGAGTGGTTCAAACTGGAGACTTACTGTTGGTGGTGATTTCCAATTAGGTTCTGGTTCTGGTGGTAACCGGTTGTGGATGAATGGTAGTCGTATCGACTTCTATGACGGAAGTGGCACGCTTCGTATTAGAATAGGGACTTGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d02e0dac5cb801236c674366640f6eb9f23b9f64ff12bc7408615c2bda4eed21
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6845
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A novel LAMP bacteriophage infecting Escherichia coli Golomidova,A.K., Letarov,A.V., Kostryukova,E.S., Babenko,V.V. and Prokhorov,N.S. 2018-01-18 — GenBank