Protein

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Genbank accession
QWY83311.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,72
Protein sequence
MPGVIETISLIVSSLATTTLAANALYLGTSALLYGGLAFGAAALQGAFAEKPKVPKPDDGSYNLKQSVPSLPYVLGRVKKGGDYVFLEEKAGVAYHIMVWAGHRINGFVQHYLHDEKATLEGDGDVIEPAHFTSSGGTPCVRILTRLGLNAETAYSEITSAFSSIWDSNCRGDGLASVQMQARTTNQKDFMNVFPNNMPEHSAVGDGALLYDPRKDSTQGGSGSHRYTNPSTWEFSKNLALMRLWHLCHPVGGKMSYENMYLPDWANAADVCDENVTNRDGGTEKRYHGGFWFRASNDPIEVGRIMDEAAEFVVYERADGKIGVHAGEFVTPDVRLDAEAIFSIRVDKNKRRANTVLGVRGRYVNMAKDFITEDAAIYGDPYAVVDDNTERTRTFENAAIQSHNHCQRKQKLTYVRANARKVAVVADYTADGARDIPYRRFVKVHYPSRGLAEAVVEITSSVTIDLRNLRISFSGILVDSTLYDFNAATEEGEPGEAVEPLPDTGVPEPENFTPTIETEVVSGGATAAFINATWDFVDDTLAYEMEYDRTSGSTGVQSVFSDAGETQVRSGYLVDGEEYQVRLRAWGGGSKSDWTDYVLLTATADPVAPGAVTSVSVTPAAGQATFQWTAPNSSNYFACRIYINTTNDLGTATIAATEYGPPSATDLRVVTSLAAGTYYGWLRSINPSGVEGAAVATGSFVVT
Physico‐chemical
properties
protein length:703 AA
molecular weight: 76208,91190 Da
isoelectric point:5,00885
aromaticity:0,09815
hydropathy:-0,25121

Domains

Domains [InterPro]
DC_0754
STR
1–701
DC_0754
IPR003961
STR
508–606
IPR003961 IPR003961
IPR036116
STR
526–686
IPR036116
QWY83311.1
1 703
Architecture
STR
STR 1-703
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QWY83311.1
1 703
Domain Start End Length (AA) Confidence
N-terminal 1 16 16 0,9459
Central domain 17 215 200 0,0967
C-terminal 216 703 487 0,3508
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-16
Central
17-215
C-terminal
216-703

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHph_X2_25
[NCBI] 		2836083 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QWY83311.1 [NCBI]
Genbank nucleotide accession
MW960032.1 [NCBI]
CDS location
range 66643 -> 68754
strand +
CDS
TTGCCTGGTGTTATCGAAACGATCTCGCTGATCGTGTCGTCGCTGGCGACGACTACCTTGGCTGCAAACGCGCTCTATCTCGGCACGTCTGCGCTGCTCTATGGCGGGTTGGCTTTTGGCGCGGCCGCGCTGCAGGGTGCGTTCGCAGAAAAGCCGAAGGTGCCGAAGCCAGACGACGGTAGTTACAACCTTAAGCAAAGCGTTCCGTCGTTGCCTTACGTTCTTGGGCGCGTGAAGAAGGGCGGCGACTACGTATTCCTAGAGGAGAAGGCCGGCGTTGCCTATCACATCATGGTGTGGGCGGGACATCGCATCAACGGCTTCGTTCAGCACTACTTGCACGATGAAAAGGCGACGCTTGAGGGGGACGGTGACGTCATCGAGCCGGCGCACTTCACGTCATCTGGCGGCACGCCATGCGTGCGCATCCTTACCCGTCTGGGTCTGAATGCCGAAACTGCATATTCCGAAATCACTTCGGCCTTTTCGTCGATTTGGGACAGTAACTGTCGCGGCGATGGCCTCGCATCCGTACAGATGCAGGCTAGGACGACGAACCAAAAAGACTTCATGAACGTCTTCCCCAACAACATGCCGGAGCACTCGGCAGTTGGCGACGGAGCTTTGCTCTACGACCCGCGTAAGGACAGCACGCAGGGCGGATCCGGCTCGCACCGCTACACCAATCCGAGCACGTGGGAATTCTCGAAGAACCTGGCGCTGATGCGGCTTTGGCACCTATGCCACCCGGTCGGCGGCAAGATGTCTTACGAGAACATGTATCTGCCGGATTGGGCGAATGCAGCCGACGTCTGCGACGAGAACGTGACGAATCGCGATGGCGGCACGGAGAAGCGCTATCACGGCGGCTTCTGGTTCCGCGCCAGCAACGACCCGATCGAGGTTGGCCGCATTATGGACGAGGCCGCCGAGTTCGTCGTCTACGAGCGCGCCGACGGCAAGATCGGCGTTCATGCCGGCGAGTTCGTGACGCCTGACGTGCGGCTCGACGCCGAGGCAATATTCAGCATCCGCGTGGATAAGAACAAGCGCCGCGCCAACACCGTGCTCGGCGTCCGCGGACGGTACGTCAACATGGCCAAGGACTTCATCACCGAAGATGCGGCGATCTACGGCGACCCGTATGCGGTTGTCGACGACAACACGGAGCGCACGCGGACCTTTGAGAATGCTGCAATCCAGAGCCACAATCACTGCCAGCGCAAGCAGAAGTTGACTTATGTTAGGGCGAACGCTCGTAAGGTCGCTGTGGTTGCTGACTACACGGCAGACGGTGCTCGAGACATCCCGTACCGGCGCTTCGTGAAGGTGCACTATCCTAGCCGGGGACTGGCCGAAGCGGTTGTTGAAATCACGTCCAGTGTGACGATCGACCTGCGCAACCTGCGCATTTCGTTCTCGGGCATTCTGGTGGATTCCACGCTTTACGACTTCAACGCCGCAACGGAAGAGGGCGAGCCTGGCGAGGCTGTTGAGCCCTTGCCGGATACTGGCGTTCCGGAGCCGGAGAATTTCACTCCAACGATCGAAACGGAAGTGGTTTCGGGCGGCGCCACGGCGGCATTCATCAATGCCACGTGGGATTTTGTCGACGACACGCTGGCCTACGAGATGGAATACGACCGCACCAGCGGTTCGACGGGCGTGCAGTCGGTGTTCTCTGATGCTGGCGAGACGCAGGTTCGCTCAGGCTACCTCGTCGACGGCGAGGAATACCAAGTGCGTCTGCGTGCATGGGGCGGCGGCTCAAAGTCCGATTGGACTGACTACGTGCTGCTGACCGCTACCGCAGATCCGGTTGCGCCAGGTGCCGTTACATCGGTGTCTGTGACGCCGGCAGCCGGGCAGGCCACGTTCCAATGGACCGCGCCGAACTCGTCAAACTACTTCGCTTGCCGCATCTACATCAACACTACGAACGACTTGGGAACGGCAACGATTGCGGCGACCGAATACGGCCCGCCAAGCGCGACCGACTTGCGCGTCGTCACTTCGCTTGCGGCAGGCACCTATTACGGCTGGCTGCGGTCAATCAACCCATCTGGCGTTGAAGGCGCGGCAGTCGCGACGGGTTCGTTTGTCGTCACCTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
c84699f9eb8e072072a016837fbad3e50bd10a92dfe1eddea14dae8918de3433
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8789
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Hidden Diversity and Expansion of Phages in the Symbiotic Bacteria Rhizobium Gonzalez,V., Santamaria,R.I., Bustos,P., Cauwenberghe,J.V. and Juarez,S. 2017-09-25 — GenBank