Protein

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Genbank accession
ATN93580.1 [GenBank]
Protein name
tail fiber domain protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,60
Protein sequence
MGWYRAGTVAVTNGSTAVIGTGTAFIANARVGDGFRGPDGAWYEINNIASDTALSIATNYLGPSLGSGIYAVMPVQGYNKDSADQLRAATKVIATIPETKQDKNNNLTALSSLVGAADRLPYFTGAGALSLAVITSKARALLARSDTAGMQAELALVPATSLTDRTAGRLLIPGWLGLGDALPITPGQDYNTLTQPGEYFYGSGTAPTNAPIVPAHLISVKGRGLYPYQEVRPIYGNALWQRSAKVANPTAAAADWNGWVPYVTGFNMTNDPQSDAGGVISSAVVSGFRVEKFANGTMCVTGKVALASQAANSFGYQTLTLPVTFLNTANMMPGLTCNAQSTGDSYGVVFQRAASTSSILYAVRNGATAQAFEINVSVRGTWK
Physico‐chemical
properties
protein length:383 AA
molecular weight: 39917,53100 Da
isoelectric point:8,93727
aromaticity:0,08877
hydropathy:0,03446

Domains

Domains [InterPro]
DC_1966
ATT
1–381
DC_1966
cd19958
STR
184–260
cd19958
ATN93580.1
1 383
Architecture
ATT
ATT 1-381 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage VW-6S
[NCBI] 		2041487 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa HIM-6
[NCBI] 		29322 Bacillota > Clostridia > Eubacteriales > Eubacteriaceae > Eubacterium >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ATN93580.1 [NCBI]
Genbank nucleotide accession
MF975720.1 [NCBI]
CDS location
range 15731 -> 16882
strand -
CDS
ATGGGTTGGTATAGGGCTGGCACTGTTGCCGTCACGAATGGCTCGACCGCTGTTATCGGTACGGGTACGGCCTTTATCGCCAATGCTCGTGTAGGCGATGGATTCCGTGGGCCAGATGGTGCGTGGTATGAGATCAATAACATCGCAAGCGATACGGCGCTATCTATCGCCACCAATTATCTGGGGCCCTCCCTCGGTAGCGGTATCTATGCCGTGATGCCCGTGCAGGGCTACAACAAAGATTCCGCAGATCAGTTACGCGCAGCAACAAAAGTTATTGCAACAATTCCTGAAACTAAGCAGGACAAGAACAACAACCTTACTGCCTTGTCGAGCCTCGTTGGTGCCGCTGATCGCCTCCCGTACTTTACTGGAGCGGGGGCTCTATCCCTTGCAGTAATCACAAGCAAAGCCCGCGCACTTCTTGCCCGGAGCGATACCGCAGGTATGCAGGCAGAATTGGCCCTGGTTCCCGCAACTTCACTTACAGACCGCACTGCAGGTCGGCTACTGATTCCCGGGTGGCTGGGGCTTGGGGACGCTCTACCAATCACGCCGGGGCAGGATTACAACACTCTCACCCAGCCAGGTGAATACTTCTACGGCTCCGGCACTGCCCCGACGAATGCCCCAATTGTCCCCGCGCACTTGATTTCCGTTAAGGGCAGAGGTCTCTACCCATACCAGGAGGTTCGTCCAATTTACGGTAATGCTCTTTGGCAACGGAGTGCCAAAGTAGCTAACCCTACTGCTGCTGCGGCTGACTGGAACGGATGGGTTCCTTACGTTACTGGCTTCAATATGACCAATGACCCGCAGTCAGATGCGGGTGGAGTCATCTCCAGCGCGGTGGTTAGCGGCTTCCGTGTTGAAAAGTTTGCTAACGGCACGATGTGTGTAACCGGAAAGGTGGCCTTAGCAAGTCAGGCAGCCAACAGTTTTGGATACCAAACTCTGACCTTGCCTGTCACGTTTCTCAACACCGCAAACATGATGCCGGGACTGACCTGTAACGCCCAATCTACGGGTGACTCGTATGGCGTAGTTTTCCAGCGGGCAGCGTCGACTAGTTCAATACTGTACGCGGTCAGGAACGGTGCAACCGCCCAGGCATTTGAAATAAACGTATCGGTGCGGGGTACTTGGAAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
710d6b1a33254dea37d38f2188b5fe909435f10dbb95317980b1fc7080490fa9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8460
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of the cold-active bacteriophageVW-6S and VW-6B from Pseudomonas fluorescens Ji,X., Li,J., Wei,Y., Zhang,Q. and Lin,L. 2020-05 — GenBank