Protein

View in Explore
Genbank accession
UVX31978.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,55
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSYSYVERTGDGVATTFNFAFTGKGKGYLLANQVNVYTWNGTAWVSASGWSLSGTNQITFLTPPANGTRILIRRIAAKDYPFAQFEPGVMLDMASLNNTFIHLLEITQELLDGFYPDGFYLKQNLNMGGWRITNLGDGVDPKDAVNKGQLDAVHDLAESIDQKHTIWNDRQDQQIDGLLKAFDSNISYRTAPWTYEAAGGETMVFPPFYFASAIVHRDGVYQDQQAGAFEIDNNVITLADPPLRAGERVSVLVGSYITPADPGSCEWIHVAANGSTTSVDLGVSVSAIDDVTLDGLSQGRSNYTLTGTVLDFGEIIPECTVGARVQLA
Physico‐chemical
properties
protein length:328 AA
molecular weight: 35701,40460 Da
isoelectric point:4,50753
aromaticity:0,10671
hydropathy:-0,12561

Domains

Domains [InterPro]
DC_0041
STR
1–323
DC_0041
IPR005604
ATT
3–113
IPR005604 IPR011049
IPR008635
RBD
131–154
IPR008635
G3DSA:6.10.250.2040
STR
132–242
G3DSA:6.10.250.2040
UVX31978.1
1 328
Architecture
ATT
STR
ATT 1-113 | STR 114-323 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UVX31978.1
1 328
Domain Start End Length (AA) Confidence
N-terminal 1 327 327 0,9983
Central domain 328 327 1 0,4883
C-terminal 328 328 0 0,0000
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-327
Central
328-327
C-terminal
328-328

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage VLCpiA2b
[NCBI] 		2874871 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UVX31978.1 [NCBI]
Genbank nucleotide accession
ON602765.1 [NCBI]
CDS location
range 14068 -> 15054
strand -
CDS
ATGAGCTATAGCTACGTCGAGCGAACAGGGGATGGTGTAGCCACAACATTCAACTTCGCGTTTACTGGTAAAGGCAAGGGGTATCTCCTTGCCAACCAGGTTAATGTGTACACATGGAACGGCACCGCGTGGGTGTCGGCCTCCGGGTGGAGCTTGTCTGGTACTAACCAGATTACCTTCTTAACCCCTCCGGCAAACGGGACTCGCATCCTGATTCGCCGTATTGCTGCCAAGGATTACCCATTTGCTCAGTTTGAGCCTGGTGTGATGCTGGACATGGCATCTCTGAATAACACCTTCATCCACCTCCTGGAAATCACCCAGGAGCTTCTGGATGGGTTCTACCCTGATGGGTTCTACCTCAAGCAGAACCTGAATATGGGCGGGTGGCGAATCACCAACCTGGGTGATGGTGTTGACCCCAAAGATGCTGTGAACAAAGGTCAGCTTGATGCTGTCCATGATTTGGCTGAGAGCATCGACCAGAAGCACACCATTTGGAACGACAGGCAAGACCAGCAAATTGATGGTCTGCTCAAGGCCTTTGATTCCAATATCAGCTACAGGACAGCACCCTGGACCTACGAGGCGGCAGGTGGGGAGACTATGGTCTTCCCTCCGTTCTACTTTGCCTCTGCAATTGTGCACAGGGATGGTGTTTACCAGGACCAACAGGCTGGTGCCTTTGAAATTGACAACAACGTAATCACACTGGCAGACCCACCATTGCGTGCAGGTGAGCGTGTGTCTGTATTGGTTGGCTCTTATATCACACCAGCAGACCCAGGCTCCTGTGAGTGGATTCATGTGGCAGCTAATGGCTCCACAACATCGGTTGACCTTGGCGTCTCCGTGTCAGCTATTGATGACGTGACACTGGATGGCCTATCCCAAGGTCGTAGCAATTACACCCTCACAGGGACTGTACTCGATTTTGGTGAGATCATCCCAGAGTGCACTGTGGGTGCCAGGGTGCAGCTGGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
6de95b61d8550b4d87f016870632bb86ae4c57f1eb0b321fd797d8b76b0236f9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8411
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genetic determinants of host tropism in Klebsiella phages Beamud,B., Garcia-Gonzalez,N., Gomez-Ortega,M., Gonzalez-Candelas,F., Domingo-Calap,P. and Sanjuan,R. — — GenBank