Protein

View in Explore
Genbank accession
QVD48888.1 [GenBank]
Protein name
putative tail spike
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MNILRSFTETVVTTPTDTFPISFEYDEKYDAVHVFLNDVAVEDLGYTVSQVNAVTLKVEPAIPEGTVRIERETDIDKMKYIFDAGALFIDQNVDADFRQIVHSQQEVRDGFIKLRGDVLPLVHGLQEALQQAQEASEAAQEAANAAEVAAAQTQTTNKTSTFNPDVVYPKNARIMLDNGNIVRSTVANNTVNPNSDMTGWFDEGTNVVFVESIADMLAINNPHNGQVVYVKGYYAATNFALAKPYSGGGHRIYIASRKTENDGFLCINGWVLQVENNTVTPEHAGAIGNNKDFDQSIPLNKVVNSGFDVSLSATTYYVSKPVRKWKRGGKITGTGELTTKIVKTTNNIEGFGTTTINGKVMNFDVDAVLILMPDTTELDWYVQQTHISGFSLAYDDSLKNRGYGLYTPLICRSSIKHISISNCKNGVYSVDSWMVTWERVEASADKPFIFGAPETNWLPNNTSQTFISCWAKNAKGSDSYAWYLLNMQYSTFISCGNDFNGTDGSPINSLIYMRYSDVSFIDMGFEFAHAYNLLYCEDSVANFVAPNIVGFENRYQREVAWNTYNAMFNCVSNSTVKISGGRINTMYTSTNSTTVAAFSMCQGNSKLIVDLPIRFEGSNRLEEIAKTTSSTALLPAFGMYCDSTSKVDGYINNDHIVLAPTNDRFLTTSQIRSTPINPQDVNLNDIFGFAGNYAQPSGALAQASRNYPEPFVATDILSMSNTQIAGVSYDGGGGNLYFRVKNWSFGINAWRQILSSGNTTVDANGFIKAASPIVKLFADKIELNDEAADQNIIFEKLGVGDYLIKNSHGFSNDGWYIEAPKDANGNNLFALVYKTLENGDISVKTYAKKFDIETASIIADISKPVDINEGRWIDVRLN
Physico‐chemical
properties
protein length:878 AA
molecular weight: 96926,24670 Da
isoelectric point:4,89176
aromaticity:0,10820
hydropathy:-0,22995

Domains

Domains [InterPro]
DC_0471
ATT
4–320
DC_0471 DC_0709
Coil
Unmapped
122–152
Coil cd19958 IPR058008
QVD48888.1
1 878
Architecture
ATT
STR
ATT 4-320 | STR 356-878
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QVD48888.1
1 878
Domain Start End Length (AA) Confidence
N-terminal 1 294 294 0,9956
Central domain 295 657 364 0,9796
C-terminal 658 878 220 0,9822
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-294
Central
295-657
C-terminal
658-878

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage vB_AbaP_APK128
[NCBI] 		2806605 Uroviricota > Caudoviricetes > Autographivirales > Beijerinckvirinae > Friunavirus
Host Acinetobacter baumannii
[NCBI] 		470 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Moraxellales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QVD48888.1 [NCBI]
Genbank nucleotide accession
MW459163 [NCBI]
CDS location
range 35203 -> 37839
strand +
CDS
ATGAATATACTACGCTCATTTACAGAGACAGTGGTGACTACACCTACAGATACTTTCCCTATCAGTTTTGAATATGATGAGAAGTATGATGCTGTACATGTCTTTCTTAATGATGTAGCAGTTGAGGACTTGGGGTACACTGTATCTCAAGTTAATGCTGTTACTCTAAAAGTTGAACCTGCTATTCCAGAAGGTACTGTTCGTATTGAACGTGAGACTGACATTGATAAGATGAAGTACATCTTTGATGCTGGTGCGTTGTTCATTGATCAGAACGTGGATGCAGATTTTCGACAGATCGTACATTCTCAGCAAGAGGTGCGAGATGGTTTTATTAAACTACGTGGTGATGTACTACCATTAGTACACGGTTTACAAGAAGCTTTGCAACAAGCACAAGAGGCTAGTGAAGCTGCTCAAGAGGCTGCTAATGCAGCAGAAGTAGCTGCTGCACAAACACAGACTACTAATAAAACTTCAACCTTCAACCCTGACGTAGTTTACCCTAAAAATGCACGTATTATGCTTGATAATGGCAATATTGTTCGCTCTACCGTTGCGAATAACACAGTTAACCCGAATAGTGATATGACTGGATGGTTTGACGAAGGTACTAATGTCGTTTTTGTAGAATCTATAGCTGATATGCTTGCAATAAATAACCCTCATAATGGACAAGTTGTTTATGTTAAAGGTTATTATGCAGCAACTAATTTTGCATTAGCAAAGCCATATAGTGGTGGTGGTCATCGTATTTATATTGCATCACGCAAAACTGAAAACGATGGTTTCCTATGCATCAATGGGTGGGTTCTACAAGTTGAGAACAACACAGTAACACCTGAACATGCTGGAGCAATAGGCAATAACAAGGATTTTGACCAGTCCATTCCGTTGAATAAAGTCGTAAACTCAGGGTTTGATGTATCGCTATCAGCAACAACATATTATGTCTCAAAACCAGTTAGAAAATGGAAGCGTGGCGGAAAAATTACAGGGACTGGTGAGCTAACAACCAAGATTGTGAAAACCACAAACAACATCGAGGGATTCGGCACAACAACAATTAACGGAAAGGTAATGAACTTTGATGTTGATGCTGTTTTAATCCTAATGCCTGATACTACAGAGTTAGATTGGTACGTCCAACAGACACATATAAGTGGCTTTTCACTAGCATACGATGATTCTTTGAAAAACCGTGGTTATGGTTTATATACACCATTGATATGCCGATCAAGTATAAAACATATATCTATTTCAAATTGTAAAAACGGTGTTTACTCGGTTGACTCTTGGATGGTGACTTGGGAGCGCGTTGAAGCGAGCGCAGATAAGCCTTTCATTTTTGGCGCCCCAGAGACTAATTGGTTGCCTAATAATACATCACAAACATTCATATCTTGTTGGGCTAAAAACGCAAAAGGTTCTGATAGTTACGCTTGGTACTTGCTAAATATGCAGTATTCAACATTTATTTCTTGCGGTAATGATTTTAACGGCACTGATGGAAGCCCGATTAACTCACTAATCTACATGCGTTATTCAGATGTCAGCTTTATTGACATGGGTTTTGAGTTTGCACATGCATATAACTTGTTATACTGTGAAGACTCTGTAGCAAACTTTGTAGCTCCGAATATTGTTGGATTTGAGAATAGGTATCAACGTGAAGTTGCATGGAATACTTACAACGCTATGTTTAACTGTGTGTCAAATTCCACAGTTAAAATAAGTGGAGGACGTATAAATACTATGTACACCTCGACTAACTCTACAACTGTTGCTGCATTCAGTATGTGTCAAGGGAATTCTAAGCTTATTGTAGATTTGCCGATTAGATTTGAGGGTAGTAATAGGTTAGAAGAAATTGCTAAGACAACATCTTCAACAGCGCTACTACCTGCGTTCGGTATGTACTGTGACTCCACATCTAAAGTTGATGGTTATATTAATAATGATCACATTGTCTTAGCCCCAACTAACGATAGATTTTTAACAACATCACAAATCAGAAGTACACCGATTAATCCACAAGATGTAAATTTAAATGACATTTTTGGATTTGCAGGTAATTATGCACAACCAAGCGGTGCTTTAGCTCAAGCATCCAGAAACTATCCTGAGCCTTTTGTAGCAACAGACATCCTGAGCATGAGCAACACTCAAATCGCAGGTGTTTCTTATGATGGTGGTGGTGGAAATCTCTATTTCAGAGTGAAAAACTGGTCATTTGGTATTAATGCTTGGCGTCAGATTTTGTCATCTGGCAATACAACCGTAGATGCCAATGGATTTATTAAAGCTGCGTCACCTATCGTAAAACTATTTGCAGATAAGATTGAACTCAATGATGAAGCTGCTGATCAAAATATCATTTTTGAAAAGTTGGGAGTTGGTGACTATTTAATTAAAAATAGTCATGGTTTCTCTAATGATGGTTGGTATATTGAAGCTCCAAAAGACGCAAATGGTAACAATCTATTTGCATTAGTATATAAAACTCTTGAAAATGGAGACATTTCAGTAAAAACCTATGCCAAAAAATTTGATATTGAAACAGCTTCAATTATTGCGGATATTTCTAAACCAGTTGATATTAACGAAGGGCGTTGGATTGATGTTCGACTAAATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2ce4707107eefeb340efeee9a264b48211055f3bad7b3335f049d695141e6331
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2951
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50