Protein

View in Explore
Genbank accession
WPK33030.1 [GenBank]
Protein name
non-contractile tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MANVIKTVLTYPLDGSNRDFNIPFEYLARKFVVVTLIGVDRKVLTLNTDYRFATRTTISLTKSWGPADGYTTIELRRVTSTTDRLVDFTDGSILRAYDLNVAQIQTMHVAEEARDLTADTIGVNNDGHLDARGRRIVNLANAVDDRDAVPLGQLKTMNQSSWQARNEALQFRNEAETFRNQADGFKTESGTNAANTKQWRDEAYGFRNEAEQFKNTAGQYATSAGNSATAARQSEVNAGNSATASADSAASSKQQADRAKQEADKLGNMNAFAGAVDSVQGDTVFWRGGGYWVGGPVYGLQTNHAFRFRMGLWEEGDFLKSDLAIDRPDGIGFIEYAADKTEQHRHQIRLNQLTIAGGVLESDADDRIAHAFADQYNTKAPFFQQIRVQSTSSYHPIIKQRTYQSGRWAGCWSIGTLLNGAHPSFHIHMKDEGAGDKLWSFNTNGDFHVPGEIWADGGRVVVRNGSFDPNGRVWGIAYDSGYLDDWIRRYFIGDVYLGPQVWNRYGGGYHDIIAPSGHVQTGTTVSNGGVAGIFLRPVWLGFHNGTKRIIASQ
Physico‐chemical
properties
protein length:553 AA
molecular weight: 61151,87630 Da
isoelectric point:6,28505
aromaticity:0,10669
hydropathy:-0,49132

Domains

Domains [InterPro]
IPR005604
ATT
1–131
IPR005604 Coil
DC_0264
STR
1–551
DC_0264
WPK33030.1
1 553
Architecture
ATT
STR
ATT 1-131 | STR 132-551 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage AV103
[NCBI] 		3077249 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WPK33030.1 [NCBI]
Genbank nucleotide accession
OR352934.1 [NCBI]
CDS location
range 3226 -> 4887
strand -
CDS
ATGGCTAACGTAATTAAGACCGTTTTGACTTACCCGTTAGATGGTTCAAATCGTGATTTTAACATCCCGTTTGAATATCTAGCCCGTAAGTTCGTAGTGGTAACTCTCATTGGTGTTGACCGTAAGGTACTCACACTTAATACAGATTATCGCTTTGCTACGCGCACTACTATCTCGCTAACCAAATCTTGGGGACCTGCGGATGGTTACACTACTATTGAGCTACGCCGAGTAACCTCCACGACTGACCGTCTTGTTGACTTTACGGATGGTTCAATCCTGCGTGCTTACGACCTTAACGTGGCTCAGATTCAGACTATGCATGTAGCGGAAGAAGCCCGTGACTTAACTGCGGATACTATTGGTGTCAACAATGATGGTCACTTGGATGCCCGTGGTCGTCGTATCGTGAACCTAGCGAACGCCGTTGATGACCGTGACGCTGTTCCGCTTGGTCAACTTAAGACCATGAACCAAAGCTCATGGCAGGCGCGTAACGAGGCCCTGCAGTTCCGTAATGAGGCTGAGACTTTCAGAAATCAAGCGGATGGCTTTAAGACCGAGTCTGGCACTAATGCTGCTAACACGAAGCAGTGGCGTGATGAGGCTTATGGGTTCCGTAATGAGGCTGAACAGTTCAAGAACACCGCTGGTCAATACGCTACGTCTGCTGGTAACTCCGCTACCGCTGCACGCCAATCTGAGGTAAACGCTGGGAACTCAGCTACGGCCTCAGCGGATTCTGCGGCTTCTTCAAAACAGCAAGCAGACCGAGCGAAGCAGGAAGCAGACAAACTTGGCAACATGAATGCTTTTGCTGGTGCTGTAGATAGCGTTCAGGGTGATACTGTATTCTGGAGAGGAGGGGGCTATTGGGTTGGGGGTCCCGTATACGGACTCCAAACTAACCACGCATTTAGGTTCCGTATGGGTCTTTGGGAAGAAGGCGACTTCCTTAAGTCTGACCTCGCTATTGACCGACCGGACGGTATAGGGTTCATAGAGTATGCAGCGGACAAGACTGAGCAACATCGTCACCAGATTAGACTTAATCAGTTAACAATAGCTGGCGGTGTGTTAGAGTCAGATGCTGATGATCGCATAGCTCACGCTTTCGCTGACCAGTACAACACTAAAGCTCCTTTCTTCCAACAGATTCGTGTACAATCTACAAGCTCATATCACCCAATAATAAAGCAACGAACTTACCAATCTGGACGGTGGGCAGGATGCTGGTCTATCGGTACATTGCTGAATGGAGCGCATCCGTCATTCCACATACATATGAAAGACGAAGGGGCAGGTGATAAACTTTGGTCGTTCAATACCAATGGAGACTTCCACGTCCCTGGGGAGATTTGGGCCGATGGTGGACGTGTGGTTGTACGGAATGGCTCTTTTGACCCTAATGGTAGAGTTTGGGGTATTGCGTATGATTCCGGATACCTAGATGATTGGATACGAAGATATTTCATAGGGGATGTCTATCTAGGTCCTCAAGTGTGGAACCGATACGGTGGAGGTTATCACGACATTATAGCGCCATCTGGACATGTTCAAACAGGTACAACCGTTAGTAATGGGGGTGTTGCTGGTATCTTTTTAAGACCAGTATGGCTTGGTTTCCATAATGGCACAAAAAGAATCATTGCGTCACAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
435e0ec18d9ed4dbc10ec9e2e9d17c295c3ff0e974a7538ec265cbdb0c883045
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7031
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A collection of diverse bacteriophages for biocontrol of ESBL- and AmpC-beta-lactamase-producing E. coli Vitt,A.R., Sorensen,A.N., Bojer,M.S., Bortolaia,V., Sorensen,M.C.H. and Brondsted,L. 2023 — GenBank