Protein

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Genbank accession
QPZ53723.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MAYSVIKKPSDYFNTKLYTGTGATQSITGVGFQPDFTWIKNRNSTNSHEAFDSVRGATKTLYPNTTDAEYVNLTNSLTSFDSDGFTVGGGAGANQSGSGIASWNWLANGAGVANTDGSITSTVSANTTSGFSIVKFTGTGSALTAGHGLGVKPSMIIAKSTTIANNWIVQHGSLGATNTIFLDNTNPSQTGTSFWNDTEPTSSVFSLGNWGGINTSGSGIIAYCFAEKQGFSKFGSYTGNGSTDGTFVYTGFKPAFVMVKKTSGTDDWRMFDNKRPGRNVIDDELKANTSGAEGAGDKMDFLSNGVKFRVSSSVNASGTFIYMAFAEQPLVGDNPATAR
Physico‐chemical
properties
protein length:339 AA
molecular weight: 35588,67440 Da
isoelectric point:6,29892
aromaticity:0,11209
hydropathy:-0,28643

Domains

Domains [InterPro]
IPR055906
STR
8–329
IPR055906
QPZ53723.1
1 339
Architecture
STR
STR 8-329 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pelagibacter phage HTVC204P
[NCBI] 		2796524 No lineage information
Host Candidatus Pelagibacter sp. FZCC0015
[NCBI] 		2268451 Pseudomonadota > Alphaproteobacteria > Candidatus Pelagibacterales > Candidatus Pelagibacteraceae > Candidatus Pelagibacter >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QPZ53723.1 [NCBI]
Genbank nucleotide accession
MW273926.1 [NCBI]
CDS location
range 12903 -> 13922
strand -
CDS
ATGGCATATTCGGTAATTAAAAAACCTTCTGATTATTTTAATACTAAACTTTATACTGGTACAGGTGCAACTCAATCTATAACAGGAGTTGGTTTCCAACCAGATTTTACATGGATAAAAAATAGAAATTCTACAAATTCACATGAAGCATTTGATTCTGTCAGAGGTGCTACTAAAACATTATATCCAAATACAACAGATGCAGAATATGTAAATTTAACTAATTCTTTAACATCTTTTGATAGTGATGGATTTACAGTTGGTGGTGGTGCTGGTGCAAATCAAAGTGGAAGTGGAATAGCATCATGGAACTGGTTAGCAAATGGTGCAGGTGTAGCTAATACAGATGGTTCTATAACATCTACAGTTTCAGCTAATACTACAAGTGGATTTAGTATTGTTAAATTTACTGGTACAGGAAGTGCTTTAACTGCAGGTCATGGTTTAGGTGTGAAACCATCTATGATTATTGCTAAAAGCACAACAATAGCAAATAATTGGATTGTTCAACATGGTTCTTTAGGTGCAACTAATACAATATTTCTTGATAATACAAATCCATCACAAACAGGAACTTCATTTTGGAATGATACAGAACCAACTTCTAGTGTTTTTAGTTTAGGAAACTGGGGTGGAATAAATACTTCTGGCTCTGGTATTATTGCCTACTGCTTCGCAGAGAAACAAGGCTTCTCAAAATTTGGAAGCTACACAGGAAATGGAAGTACAGATGGAACATTTGTTTATACAGGATTTAAACCTGCTTTTGTTATGGTTAAAAAAACAAGTGGTACAGACGATTGGAGAATGTTTGATAATAAAAGACCAGGAAGAAATGTAATTGATGATGAATTAAAAGCTAATACAAGTGGTGCTGAGGGTGCAGGAGATAAAATGGATTTTTTAAGTAATGGAGTAAAATTTAGAGTTAGTAGTTCTGTTAATGCAAGTGGAACATTCATCTACATGGCATTTGCCGAACAACCTCTAGTCGGAGATAACCCAGCTACAGCTCGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9985731e1a82878fd757b69cc7fb68eccc54e94386894c8b81f0f4ab9bd54aee
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,9403
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic diversity, life strategies and ecology of marine HTVC010P-type pelagiphages Du,S., Qin,F., Zhang,Z. and Zhao,Y. — — GenBank