Protein

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Genbank accession
YP_003090231.1 [GenBank]
Protein name
tail spike protein
RBP type
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MSDITANVVVSMPSQLFTMARSFKAVANGKIYIGQIDTDPTNPANQIQVYVENEDGSHVPVSQPIIINAAGYPVYNGQIAKFVTVQGHSMAVYSGGSSSVQQFYFPNVLKYDPDQFKQLLSTDDGAALVGTTSGLTVQEEINDLHSKVGIINDKLNTKSYAYRNANLLASANNLLRAGGELKIVCQGDSVTIGHDTISSDVIAPPNNNPYTVAPIQYPSRLQERLLTLTNSNVTVINHGFSGDTAKLSYERWPDNPHCNVAHLMLGINDSQGVGGATLDEYVEYIEKIIKRFIDWGCGVVLHTTTPINYGQNDGGSLFAQYARAVANQYACPVFESESVIQYCKYNSVYSDGTHFNKSGYAKYGDAVASFVLSGCWVRPVRNIASYSSIQPGRASEGIGWFGKLTYLSPDYNLSYVWNGQVGKIYPGGVQSFSFFLDADAADVFFTGIITGCKISLSDPVESVDGYLPVNIMPLKSFPKEISETMSYTTQLRNSDGRKSWAGALVGRGWKTIYVNNTSSEDVYLNYLIIEPCAPDSINQVNGGQVVPGEKQVYLYKFPFNGISNPSTNLPAPAPIPSSVTIPLPKGMFRQSQEWNGYYDSFVMDITIKSDLTGGSDGIYKYSCCFKSDGSLNIYKIFKSVASGIEPTSGNIVWEDPTTGETGTGWPDSATAVCKIALNFSESTAAYYTMEIECNNVMRSYGGRMYLRETEKQSSQITTKMDTIRIHAPKEQKMNRIVSKIIGVAAFLVFLYCSAELIFIVFGFIPFNASRILSDIVMILIMLYAFYKQKKLY
Physico‐chemical
properties
protein length:792 AA
molecular weight: 87008,46810 Da
isoelectric point:5,69609
aromaticity:0,11364
hydropathy:-0,11553

Domains

Domains [InterPro]
IPR009093
ATT
1–115
IPR009093 IPR051532 DC_0640
IPR036730
ATT
2–113
IPR036730 SSF52266
IPR036730
ATT
7–111
IPR036730 SSF52266
IPR036514
STR
182–372
IPR036514
cd00229
ENZ
183–370
cd00229
IPR013830
ENZ
187–361
IPR013830
YP_003090231.1
1 792
Architecture
ATT
STR
RBD
ATT 1-115 | STR 165-372 | RBD 373-650 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_003090231.1
1 792
Domain Start End Length (AA) Confidence
N-terminal 1 148 148 0,9947
Central domain 149 774 627 0,9673
C-terminal 775 792 17 0,9252
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-148
Central
149-774
C-terminal
775-792

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage g341c
[NCBI] 		590739 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica subsp. enterica serovar Anatum
[NCBI] 		58712 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Salmonella

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_003090231.1 [NCBI]
Genbank nucleotide accession
NC_013059 [NCBI]
CDS location
range 14148 -> 16526
strand +
CDS
ATGTCAGATATCACTGCCAATGTTGTAGTATCAATGCCGAGCCAGCTCTTCACAATGGCTCGATCTTTTAAAGCCGTAGCCAATGGAAAAATTTATATCGGCCAGATTGATACAGACCCTACCAACCCAGCAAACCAGATTCAGGTTTATGTTGAGAATGAAGACGGTTCTCACGTTCCTGTTTCGCAACCAATCATCATTAATGCTGCTGGTTACCCTGTATATAATGGACAGATTGCAAAGTTTGTGACTGTACAGGGACACTCGATGGCCGTTTACAGTGGCGGAAGTTCGTCAGTGCAGCAGTTCTACTTTCCAAATGTGTTGAAGTACGACCCTGATCAATTCAAACAACTTTTATCTACAGATGATGGTGCAGCATTAGTTGGCACGACGTCAGGATTGACTGTGCAGGAAGAAATAAATGATCTACATTCGAAAGTTGGTATTATTAATGATAAATTAAACACAAAATCTTATGCATATCGTAATGCAAATTTACTGGCTTCAGCAAATAACTTATTGCGTGCCGGAGGAGAATTAAAAATAGTTTGTCAGGGAGACAGCGTTACTATAGGGCACGACACAATCAGTTCAGATGTTATAGCTCCTCCTAATAATAACCCATACACTGTTGCTCCAATTCAGTACCCCTCTCGGTTGCAGGAACGACTGTTAACATTAACAAATTCAAATGTTACTGTAATAAACCACGGATTTAGCGGTGATACGGCAAAACTTTCTTATGAACGGTGGCCTGATAACCCTCACTGTAACGTAGCGCATCTTATGCTGGGGATAAATGATAGCCAGGGAGTAGGCGGTGCAACGCTTGACGAATATGTTGAGTATATTGAAAAAATAATTAAAAGGTTTATTGATTGGGGTTGTGGTGTGGTGCTGCATACCACCACACCAATTAATTATGGTCAGAATGACGGTGGTTCACTTTTTGCTCAATATGCAAGGGCTGTAGCTAATCAATACGCTTGTCCCGTATTTGAAAGTGAGAGTGTTATCCAATATTGCAAATATAATTCTGTATATAGTGATGGAACTCATTTTAATAAATCAGGATATGCAAAGTATGGTGATGCTGTCGCGTCATTTGTTCTTTCTGGTTGCTGGGTTAGACCTGTCAGGAATATAGCTTCATATTCATCAATTCAGCCTGGTCGGGCATCTGAGGGGATCGGGTGGTTTGGGAAATTAACATATCTATCACCTGATTACAACTTATCTTATGTCTGGAACGGTCAAGTTGGTAAAATATATCCTGGTGGTGTGCAGTCTTTTTCTTTCTTTCTTGATGCAGATGCCGCGGACGTATTTTTTACAGGTATTATTACAGGTTGCAAAATATCATTATCTGATCCTGTCGAATCAGTTGACGGATATTTGCCTGTAAATATAATGCCTCTGAAATCGTTTCCTAAAGAAATATCGGAAACAATGTCGTATACTACGCAACTCAGAAACTCAGACGGAAGAAAGTCATGGGCGGGCGCTCTTGTCGGTAGGGGTTGGAAGACTATTTATGTTAACAACACATCTTCAGAGGATGTTTATCTTAACTATTTAATTATTGAGCCTTGCGCCCCTGATAGCATAAATCAGGTAAATGGTGGGCAAGTTGTCCCGGGCGAAAAACAAGTATATTTATATAAATTCCCGTTTAATGGGATATCAAATCCAAGCACAAATTTACCAGCTCCTGCGCCAATTCCTTCTTCTGTAACCATTCCACTTCCAAAGGGAATGTTTAGACAATCACAAGAATGGAATGGGTACTACGATTCGTTTGTTATGGATATAACAATTAAATCTGATTTAACTGGAGGTAGTGATGGGATATACAAATATTCTTGTTGTTTTAAATCAGACGGAAGTCTTAATATATACAAAATATTTAAATCAGTAGCTTCTGGCATTGAGCCAACTTCTGGTAATATAGTTTGGGAGGACCCAACAACAGGCGAAACAGGTACTGGCTGGCCTGATTCCGCCACCGCTGTCTGTAAAATAGCTCTTAATTTCTCAGAATCAACTGCAGCATATTATACAATGGAAATTGAGTGCAATAACGTTATGAGAAGTTATGGTGGCAGAATGTACTTACGTGAAACTGAAAAGCAATCTTCACAGATTACTACAAAAATGGATACGATACGCATCCATGCGCCAAAGGAGCAGAAAATGAACCGGATCGTATCTAAAATAATAGGGGTAGCAGCATTTTTAGTATTCCTATATTGTTCTGCGGAGTTAATATTTATAGTATTTGGCTTTATTCCGTTTAACGCATCGAGAATATTGTCTGATATTGTAATGATATTAATCATGCTGTATGCTTTTTACAAGCAAAAGAAGTTATATTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
e84620cd850831358bd1720187112dc7132625d50e55dd5df4d533467615358e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6511
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50