Protein

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Genbank accession
UBF21271.1 [GenBank]
Protein name
baseplate hub
RBP type
TF
Evidence RBPdetect
Probability 0,58
Protein sequence
MNCEDAEISFAFLGEDNDLDNPIVEIRPLTMDFQRNINQFDFVRSKFSQGVAEHIESAVLDDEGILNRPRPVVIKFGGMPIHRMLYLPDAVQFGVNNVHIELHDVQKYLDRGVVDYQRQNVRLEDAYRYVFNQRDTSDGEMFSGIKFSVPEEAFDQLHSRYKPGLGPITLKNQQSWDLIRQARSDQTGAFEPKAESDVIRDLEAENVHNIIDGHYALDFKQVSPWEAILEMNEKFGVTTWVAPDGYLWVGSRNATGIDHVAAPDDPRVWKLIDYNITPPRDPIMKVVVRGKQVHDPSDSFVDNVGEFVNQSRNILDFRMEGVAERPDLNYGRVITPENLDAAADGLKEIAKRRLVNEQQKQWSGNIELLPSHSGESWTDIRDVQIGDGVVTIPPESNGGECRGNIQLEKFTITGVHHTLTENSEWTLRLDVVPITDGHLHPDNVKTYNRYFDPTSKEYVDEETYEARKEADKGFQLSDII
Physico‐chemical
properties
protein length:480 AA
molecular weight: 54752,35330 Da
isoelectric point:4,78217
aromaticity:0,08958
hydropathy:-0,56833

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Halorubrum phage HRTV-13
[NCBI] 		2877993 Uroviricota > Caudoviricetes > Thumleimavirales > Haloferacalesvirus > Haloferacalesvirus hv5
Host Halorubrum sp.
[NCBI] 		1879286 cellular organisms > Archaea > Methanobacteriati > Methanobacteriota > Stenosarchaea group > Halobacteria

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UBF21271.1 [NCBI]
Genbank nucleotide accession
MZ334510 [NCBI]
CDS location
range 19017 -> 20459
strand +
CDS
ATGAATTGTGAAGACGCTGAGATTTCGTTTGCGTTTCTCGGAGAGGACAACGACCTCGACAATCCGATTGTTGAGATTCGTCCTCTCACGATGGATTTCCAGCGGAATATCAATCAGTTCGATTTCGTTCGCTCGAAGTTCTCACAAGGCGTGGCTGAACACATCGAGTCGGCTGTCCTCGATGATGAAGGAATCCTGAATCGGCCCCGTCCTGTCGTTATCAAGTTCGGCGGGATGCCGATTCACCGGATGCTCTACCTCCCCGACGCGGTTCAGTTCGGGGTCAACAATGTCCACATCGAGCTTCACGACGTACAGAAGTACCTCGACCGTGGCGTTGTGGACTACCAGCGGCAGAACGTCCGACTCGAAGATGCGTACCGCTACGTGTTCAATCAGCGGGACACCTCGGACGGCGAGATGTTCTCTGGTATCAAGTTCTCTGTTCCCGAGGAAGCCTTCGACCAGCTCCACAGTCGGTACAAGCCCGGCTTGGGGCCGATTACGCTGAAGAACCAGCAGTCGTGGGACTTGATTCGGCAGGCCCGGAGCGACCAGACCGGCGCGTTTGAGCCGAAGGCTGAGAGTGACGTTATCCGCGACCTCGAAGCGGAGAACGTTCACAACATCATCGACGGGCACTACGCCCTCGACTTCAAGCAGGTTTCCCCGTGGGAGGCCATTCTCGAAATGAACGAGAAGTTCGGAGTCACAACGTGGGTGGCCCCGGACGGATACTTGTGGGTCGGTAGTCGGAACGCAACGGGAATTGACCACGTTGCGGCTCCCGACGACCCCCGAGTGTGGAAGCTAATCGACTACAACATCACTCCGCCCCGCGACCCGATTATGAAGGTCGTGGTTCGGGGGAAGCAGGTTCACGACCCGAGCGACAGTTTCGTTGATAACGTCGGGGAGTTCGTGAATCAGAGCCGGAACATCTTGGACTTCCGTATGGAGGGTGTGGCTGAGCGCCCTGACCTAAACTATGGGCGCGTCATTACTCCAGAAAACCTCGATGCGGCGGCTGACGGTCTAAAGGAAATTGCTAAGCGTCGGTTGGTGAACGAACAGCAGAAGCAATGGAGCGGGAACATCGAGCTTCTTCCGTCTCACTCCGGCGAGTCTTGGACTGATATTCGGGACGTTCAAATCGGAGACGGCGTTGTAACGATTCCCCCGGAAAGCAACGGCGGAGAGTGTCGGGGGAATATTCAGTTGGAGAAGTTCACGATTACTGGTGTCCACCACACGCTGACGGAAAACAGCGAGTGGACGCTCCGACTCGATGTGGTTCCGATTACGGATGGACACCTCCACCCGGACAACGTGAAGACCTACAACCGCTACTTCGACCCGACGAGCAAGGAGTACGTGGACGAGGAAACCTACGAAGCCCGGAAAGAGGCAGACAAGGGCTTCCAACTGAGCGACATTATCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
fd2b0a95cd58feff59817cc12e63f886effeafa8777501947b6eb5fae400ed8b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6194
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50