Protein

View in Explore
Genbank accession
UIS24736.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,59
Protein sequence
MAFVTGTAANHVDALDKLRLFLTSNDTLSSLGQTWAQLRWVPDNVEAVDTNIPFGSGTQLPRLFRPDYRTQNYTSETNGQYLSSTSFTSGQYVRLKMRAAKAVTKFTLKAGTGSSLTSYTPRNFRLEYSDDGSTWTSAATLTDQRAWVANEERTFAVPATGEHLWWRLVTLQTGDFQGTLTGQYWELRSIWLYDGDVLVSSSESSLVVKGPGLAGDEEIFLAFRTTYNTGTGEYAILVQGLTGYLPNEQSLHRQPGLHPSGWPVVPLWSAAMPYWFVGSGRRVVFVFKVSTVFESGYAGFFLPYASPEQYPYPMAIGGSMSPASSSYRYDYVSAAHSCFVMPGGNTGTSSSVDVVYNTTLNVMLPDGSWFDFQNRPTNNSNNSESYLTWSNSPASVLPHGTFSESVTAGYGFRENIGGGFSVFPATLFQRRTAGRFLGELDGCFQISGFQNGSENTGTIAGEDYLVFQNTYRTDVREYWALKAE
Physico‐chemical
properties
protein length:484 AA
molecular weight: 53443,60710 Da
isoelectric point:5,29514
aromaticity:0,14050
hydropathy:-0,28182

Domains

Domains [InterPro]
DC_0072
STR
1–112
DC_0072 DC_0072
G3DSA:2.60.120.260
STR
63–187
G3DSA:2.60.120.260
IPR008979
STR
80–156
IPR008979
DC_0072
STR
107–170
DC_0072
UIS24736.1
1 484
Architecture
STR
STR 1-484
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Stenotrophomonas phage vB_SmaS-AXL_1
[NCBI] 		2909581 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Stenotrophomonas maltophilia
[NCBI] 		40324 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Lysobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UIS24736.1 [NCBI]
Genbank nucleotide accession
OL674541.1 [NCBI]
CDS location
range 29303 -> 30757
strand +
CDS
ATGGCCTTCGTAACGGGCACGGCCGCCAACCACGTGGACGCGCTGGACAAGCTGCGCCTGTTCCTGACCAGCAACGACACCCTGTCGTCGCTGGGCCAGACCTGGGCGCAGCTCCGGTGGGTGCCGGACAACGTGGAGGCCGTCGACACCAACATACCGTTCGGCTCGGGCACCCAGCTGCCGCGCCTGTTCCGGCCGGACTACCGGACCCAGAACTACACCTCCGAGACCAACGGGCAGTACCTCAGCTCGACCTCGTTCACCTCCGGGCAGTACGTGCGCCTGAAGATGCGCGCCGCCAAGGCGGTGACCAAGTTCACCCTGAAGGCGGGCACCGGCTCGAGCCTGACGAGCTACACCCCGCGCAACTTCCGGCTGGAGTACTCCGACGACGGGTCGACCTGGACCTCCGCCGCCACCCTTACGGACCAGCGGGCCTGGGTGGCCAACGAGGAGCGCACGTTCGCGGTGCCCGCGACCGGCGAGCACCTCTGGTGGCGGCTGGTGACCCTGCAGACCGGCGACTTCCAGGGCACGCTGACCGGGCAGTACTGGGAGCTGCGCTCCATCTGGCTGTACGACGGCGACGTGCTGGTGTCGTCCTCCGAGTCCAGCCTGGTGGTCAAGGGCCCCGGCCTGGCGGGCGACGAGGAGATCTTCCTCGCCTTCCGAACCACCTACAACACCGGCACGGGCGAGTACGCCATCCTGGTGCAGGGCCTCACCGGCTACCTGCCGAACGAGCAGTCCCTCCACAGGCAGCCCGGCCTGCACCCGAGCGGGTGGCCGGTGGTGCCGCTGTGGAGCGCTGCCATGCCCTACTGGTTCGTGGGCAGCGGCCGCCGGGTCGTCTTCGTGTTCAAGGTGTCCACGGTGTTCGAGTCTGGGTACGCCGGGTTCTTCCTGCCGTACGCCTCGCCTGAGCAGTACCCGTACCCCATGGCCATCGGCGGGTCCATGTCGCCCGCCTCGTCGAGCTACCGGTACGACTACGTGTCGGCGGCGCACAGCTGCTTCGTCATGCCCGGCGGGAATACCGGCACCAGCTCTAGCGTGGACGTGGTGTACAACACCACCCTCAACGTGATGCTGCCCGACGGCAGCTGGTTCGACTTCCAGAACCGGCCCACCAACAACAGCAACAACTCCGAGAGCTACCTGACCTGGAGCAACTCCCCGGCCAGCGTGCTGCCGCACGGGACCTTCAGCGAGTCCGTCACCGCGGGCTACGGCTTCCGCGAGAACATCGGCGGGGGCTTCTCGGTCTTCCCGGCCACGCTGTTCCAGCGGCGCACGGCCGGCCGGTTCCTCGGCGAGCTGGACGGCTGCTTCCAGATCTCGGGGTTCCAGAACGGCTCGGAGAACACCGGCACCATCGCGGGCGAGGACTACCTCGTCTTCCAGAACACCTACCGGACCGACGTACGCGAGTACTGGGCCCTCAAGGCGGAGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
70e0caeae74602d882de18cf5bdcbbf13b78fd2a94a29d3d4e8af4c13a66b3a0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7166
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of Stenotrophomonas maltophilia phage AXL1 as a member of the genus Pamexvirus encoding resistance to trimethoprim-sulfamethoxazole McCutcheon,J.G., Lin,A. and Dennis,J. 2022 35717537 GenBank