Protein

View in Explore
Genbank accession
XRQ67222.1 [GenBank]
Protein name
tail tube protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,62
Protein sequence
MALTSQSVKNLKGGVSQQPDILRFANQGSAQINGWSSEDKGLQKRPPTIITKRIRSAGLAGLKPLVHLINRDATEQYYVVFLGNAIEVWDLQGNAYAVRGYNGYADCPDPRNDLRLVTVADYTFVVNRKKVCEADTALTHSTYPELSRRAIVNVRGGQYGRVLSITINGATTPQASIKMPNGSAEKVPPSTPPGPYDGMNQVDMTDAGWIAAEMARLLTVSMGPAGWTFTAGAGHVLVTAPVGVSVNSIVAADGYAGQLMSAFIYQVQTFTKLPAEAPDGYIVEITGESARSGDNYWVIYDASGKVWKETAKPKIPLTLKEVTMPHALVRASDGNFDWTSLAWEGRKAGDEETNPMPSFVGGTINDVFFFRNRLGFLSGENVVMSKTSKYFSFFPSSVAALSDDDPIDVSISHNRVSILKYAVPFAEQLLLWSDQAQFVLSANGVLSSKTIELDLTTEFDVSDGARPFGIGRGVYFAAPRASYTSIKRYYAVQDVSDVKSAEDLSGHIPTYIPNTVFAIHGSGTENFVTILSDATPNRVFVYKFLYLEETLQQQSFSYWDFGKGVTVLAACCIGSYCYLMLDRPEGVYLERMEFTQNTTDFSIEAYRAYVDMKQVITLGAYDDDLNTTSFDLRLAFGGQPPAFDDVLMTIDSQGGLKVHTSDNWAAWPFIYFTGNRAGEQVVLGKRFKFTYEFSKFLIKQQADDGSVSTEDSGRLQLRRAWINYEDSGAFTISVNNGSSEFIYSMTGGRVGSQRVLGEPSVGTGQFKFPVTGNALNQRVTITSDNPNPLNVIGCGWEGNYIRRTNGI
Physico‐chemical
properties
protein length:807 AA
molecular weight: 88493,54950 Da
isoelectric point:5,38967
aromaticity:0,11152
hydropathy:-0,18017

Domains

Domains [InterPro]
IPR058003
TTP
1–807
IPR058003
XRQ67222.1
1 807
Architecture
TTP
TTP 1-807
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XRQ67222.1
1 807
Domain Start End Length (AA) Confidence
N-terminal 1 140 140 0,9891
Central domain 141 339 200 0,3366
C-terminal 340 807 467 0,2079
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-140
Central
141-339
C-terminal
340-807

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage Laces98
[NCBI] 		3415719 Viruses > unclassified bacterial viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XRQ67222.1 [NCBI]
Genbank nucleotide accession
PV477980 [NCBI]
CDS location
range 25982 -> 28405
strand +
CDS
ATGGCACTCACATCGCAATCCGTTAAGAACCTCAAAGGAGGCGTGTCGCAGCAACCGGACATCCTTCGGTTCGCCAACCAAGGGTCCGCCCAGATCAATGGATGGTCCTCTGAGGACAAGGGTCTCCAGAAGAGACCGCCAACCATCATCACCAAGCGCATCCGATCGGCTGGCCTCGCTGGCCTGAAGCCACTGGTCCACCTCATCAACCGGGACGCGACCGAGCAGTATTATGTCGTGTTCCTTGGAAACGCCATCGAGGTGTGGGATCTTCAAGGCAACGCCTATGCAGTGCGTGGTTACAACGGCTACGCAGACTGCCCAGACCCACGGAACGACCTACGCCTCGTGACGGTTGCCGATTACACCTTCGTGGTCAACCGCAAGAAGGTCTGCGAGGCCGATACAGCGCTCACGCACTCCACCTACCCGGAACTCAGTCGTCGGGCAATCGTCAACGTGCGAGGCGGTCAGTACGGTCGTGTCCTGTCGATCACCATCAACGGCGCAACGACCCCTCAGGCGTCCATTAAGATGCCCAACGGTTCCGCCGAGAAGGTCCCACCAAGTACGCCTCCCGGTCCATACGATGGGATGAACCAAGTGGACATGACGGACGCTGGGTGGATCGCCGCTGAGATGGCCCGGCTGCTCACGGTCTCTATGGGACCCGCTGGGTGGACCTTCACGGCTGGCGCTGGGCATGTCCTCGTGACTGCACCTGTGGGCGTCTCTGTGAACTCCATCGTGGCCGCTGATGGCTACGCAGGGCAGCTCATGTCCGCATTCATCTATCAGGTCCAGACGTTCACCAAGCTCCCCGCTGAGGCGCCTGATGGGTACATCGTCGAGATCACTGGTGAGTCCGCTCGCTCGGGCGACAACTACTGGGTGATCTATGACGCCTCGGGGAAGGTCTGGAAGGAGACCGCCAAGCCCAAGATCCCGCTGACCCTCAAGGAGGTAACGATGCCTCATGCGCTCGTAAGGGCGTCCGATGGGAACTTCGATTGGACCTCGTTGGCATGGGAGGGACGTAAGGCCGGTGACGAAGAGACGAACCCGATGCCGAGCTTCGTGGGTGGCACGATCAATGATGTCTTCTTCTTCAGGAACCGTCTCGGCTTCCTCTCGGGCGAGAACGTCGTCATGTCGAAGACCTCGAAGTATTTCAGCTTCTTCCCGAGCAGCGTTGCAGCACTGAGTGACGACGACCCAATCGACGTCTCGATCTCGCACAACAGGGTCTCCATCCTGAAGTACGCAGTTCCGTTCGCTGAGCAGCTCCTGCTGTGGTCCGATCAAGCTCAGTTCGTGCTCTCGGCCAATGGGGTCCTGTCCTCGAAGACCATCGAGCTGGACCTGACAACCGAGTTCGATGTTAGCGATGGTGCCCGACCGTTCGGCATTGGCCGTGGTGTCTACTTCGCTGCGCCTCGTGCGTCCTACACCTCGATCAAGAGGTACTATGCAGTTCAGGACGTCAGTGACGTTAAGTCCGCTGAGGACCTCTCCGGGCACATCCCGACCTACATCCCGAACACCGTGTTTGCGATCCATGGGTCCGGCACTGAGAACTTCGTGACGATCCTTTCGGACGCAACGCCCAATCGGGTCTTCGTCTACAAGTTCCTCTACCTCGAAGAGACCCTCCAGCAGCAGTCGTTTAGCTACTGGGACTTCGGCAAGGGCGTCACCGTGCTCGCTGCGTGCTGCATCGGCTCCTACTGCTACCTCATGCTTGACCGGCCTGAGGGCGTGTATCTGGAGCGTATGGAGTTCACTCAGAACACCACTGACTTCTCGATTGAAGCCTATCGGGCCTACGTGGACATGAAGCAGGTGATTACCTTGGGCGCCTACGACGACGACCTGAACACCACTTCGTTCGACCTGAGGCTTGCCTTCGGTGGACAGCCACCTGCCTTCGACGACGTACTGATGACCATCGACTCTCAGGGTGGCCTCAAGGTACACACCTCGGACAACTGGGCAGCTTGGCCATTCATCTACTTCACCGGTAATCGCGCTGGTGAGCAGGTGGTCCTCGGGAAGCGCTTCAAGTTCACCTATGAGTTCTCCAAGTTCCTCATCAAGCAGCAAGCTGACGATGGCTCCGTCTCCACTGAGGACTCTGGTCGGTTGCAGCTTCGCCGGGCATGGATCAACTACGAGGACTCCGGGGCGTTCACCATCTCGGTCAACAACGGATCCAGTGAGTTCATCTACTCGATGACAGGTGGCCGCGTGGGATCTCAAAGGGTCCTCGGTGAGCCATCCGTGGGAACTGGTCAGTTCAAGTTCCCGGTGACAGGTAACGCCTTGAACCAACGTGTGACCATCACCAGCGACAACCCGAACCCTCTCAACGTGATCGGCTGTGGCTGGGAGGGCAACTACATCCGCCGAACCAACGGCATCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
68414379e1484c79a3476773bf3e7a1bcad396fc3a66fb38ed5e6fc1ccf17188
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3390
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50