Protein

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Genbank accession
XRX11821.1 [GenBank]
Protein name
putative tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MSLVMQINPFEFFTDLAGNALNEGYVWIGQPNKDPRSFPVPVFFDEALTIPAALPLRTNAGYIVRGNAPTFLFINGNYSVLVQDSKSRQVFYVADFLMTGNSAAVSLGDLANNTAPGKGASMVGDLGGTTVQAFIDFTRANNNVVSGSANIVAAIAAGGEVIIANGGHYMNAPATCDYAADPEVGFAGNPSKRYNISGKSPGGTILSIQHNDYAIRLLGSFPLTQNFGGFDAIGNLTLVGQSVTTPNTTNTGGLGLFIQSKAFTNVYRFIALNLRRGLHLDAVLTSTIEDVTIRGCYEGLVCEDINSSAGPNAMNFRRVEIEGSTSYGARLELGANTQFDNLTIEGCAAMGGIATATLWQSKIGSIAVVVNLNSAYFELNGGPADLYISHVASQDMVMNINGGLFHRSTPDRYTNTNLLLRSEPGAGRVLVKLSGVKFHGSFGYIPLNTRPYFDVGARCEVVWDNACQFTEMTSMNYWLCLDMDYTFVISASGAILSGPIGFSCAKVATGKYRIARTLGKAEFSKFKDDYSVVVTTSLPASNGYVSDRQTTLVELTIDNGNVLIDAQFSVTIKRIAGYYP
Physico‐chemical
properties
protein length:580 AA
molecular weight: 62041,46410 Da
isoelectric point:5,48953
aromaticity:0,10172
hydropathy:0,08362

Domains

Domains [InterPro]
IPR036730
ATT
2–100
IPR036730
IPR036730
ATT
2–95
IPR036730
IPR036730
ATT
7–97
IPR036730
XRX11821.1
1 580
Architecture
ATT
ATT 2-100 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XRX11821.1
1 580
Domain Start End Length (AA) Confidence
N-terminal 1 147 147 0,9403
Central domain 148 470 324 0,9910
C-terminal 471 580 109 0,9827
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-147
Central
148-470
C-terminal
471-580

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage PfAn1
[NCBI] 		3411810 Viruses > unclassified bacterial viruses >
Host Pseudomonas fluorescens
[NCBI] 		294 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XRX11821.1 [NCBI]
Genbank nucleotide accession
PV364321 [NCBI]
CDS location
range 17444 -> 19186
strand +
CDS
ATGTCATTGGTCATGCAGATCAACCCGTTTGAATTTTTCACAGACCTTGCCGGTAACGCCCTTAACGAGGGGTATGTCTGGATTGGCCAACCGAACAAGGATCCTCGGTCTTTCCCTGTTCCTGTTTTCTTCGATGAGGCCCTGACGATCCCGGCAGCCCTTCCGCTGCGCACCAACGCCGGCTACATCGTTCGCGGTAACGCGCCTACCTTTCTGTTCATTAACGGGAACTACAGCGTCCTTGTGCAAGACAGCAAGAGCCGTCAGGTTTTCTACGTCGCTGACTTTTTGATGACCGGCAACAGTGCTGCTGTTTCTCTGGGTGACCTTGCGAACAACACCGCCCCAGGTAAAGGCGCCTCCATGGTTGGCGATCTTGGTGGTACCACAGTCCAGGCATTTATCGACTTCACGCGGGCAAACAACAACGTGGTCAGTGGCTCGGCAAACATCGTGGCTGCAATTGCTGCGGGCGGTGAAGTTATCATCGCAAACGGTGGCCACTACATGAACGCGCCGGCAACTTGTGACTATGCAGCAGATCCAGAGGTTGGATTTGCTGGCAACCCATCGAAGCGTTACAACATTTCCGGTAAAAGCCCAGGCGGTACAATTCTAAGCATCCAGCACAATGATTATGCAATACGGCTGCTTGGCAGCTTTCCGTTAACCCAGAACTTTGGTGGGTTCGATGCAATCGGAAACCTAACCCTCGTCGGTCAGTCCGTAACTACGCCAAACACAACAAACACCGGAGGTCTTGGCCTGTTTATTCAGTCAAAGGCCTTTACCAATGTTTACAGATTTATAGCTCTTAACTTAAGGAGAGGCCTGCATCTTGACGCAGTTCTTACATCAACTATAGAGGATGTAACTATTAGGGGATGCTATGAGGGACTAGTATGCGAGGATATAAATTCGTCTGCTGGCCCCAATGCTATGAATTTCAGGAGAGTGGAGATTGAAGGATCTACAAGTTATGGGGCTAGGCTTGAGCTAGGCGCCAACACTCAATTCGATAACCTGACCATTGAGGGCTGCGCCGCAATGGGTGGAATTGCTACCGCAACTTTATGGCAAAGCAAAATAGGATCAATAGCTGTTGTAGTTAACCTTAACTCTGCATATTTTGAATTAAACGGAGGTCCGGCAGATCTTTATATATCTCACGTTGCTTCTCAAGATATGGTTATGAACATTAACGGCGGCCTTTTCCACAGGTCAACACCCGACCGCTACACAAATACCAACCTTCTCCTGCGCAGCGAGCCGGGCGCTGGCCGGGTTCTTGTGAAGCTGAGCGGCGTCAAGTTCCATGGCAGCTTTGGATACATCCCGCTGAACACCCGTCCTTACTTCGACGTTGGTGCTCGCTGTGAAGTGGTGTGGGATAACGCCTGCCAGTTCACAGAAATGACCAGCATGAATTATTGGCTGTGTCTCGATATGGATTACACGTTTGTGATCAGTGCTTCCGGGGCGATCTTGTCGGGGCCTATCGGGTTCAGCTGCGCCAAGGTTGCCACTGGAAAATACAGAATCGCAAGAACGCTGGGTAAGGCAGAGTTTTCAAAGTTTAAGGATGATTATTCAGTTGTCGTTACTACGTCCCTTCCCGCGTCAAATGGGTATGTGTCAGATAGACAGACGACTCTTGTAGAGTTGACCATTGACAACGGGAACGTCCTTATAGACGCGCAATTCTCTGTAACCATCAAGCGCATTGCAGGGTACTACCCATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
a2949233aa83f221e25cd2a4ca851d6a8717d2ecadc59ea553535d20e0596245
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7648
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic characterization of the novel bacteriophage PfAn1 from Lake Baikal infecting Pseudomonas fluorescens Gorshkova,A., Belykh,O., Tikhonova,I., Xi,L., Siniagina,M., Drucker,V. and Potapov,S. — — GenBank