Protein

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Genbank accession
ATI17132.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MDMPGPTPREWGQLAISYGARRCYIANSTYNGGLAVMELLHGLNTTVDPSGFVKVASPIIKVFRDGSFETNEESEGASVERVSTGVYKVSGVLGLNSDTSWGGVNGGFEVPVDLNKQPRIWLDYEVEADGSIVVKTYHRTHDSSPSFARNKIDGFSNGDPIDIPSDSFVSIRVNMP
Physico‐chemical
properties
protein length:176 AA
molecular weight: 19089,04520 Da
isoelectric point:4,88869
aromaticity:0,09091
hydropathy:-0,28864

Domains

Domains [InterPro]
DC_0709
STR
3–176
DC_0709
IPR058008
RBD
44–176
IPR058008
ATI17132.1
1 176
Architecture
STR
STR 3-176
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage IMM-001
[NCBI] 		2041759 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ATI17132.1 [NCBI]
Genbank nucleotide accession
MF630922.1 [NCBI]
CDS location
range 31161 -> 31691
strand -
CDS
ATGGATATGCCTGGCCCAACTCCACGCGAGTGGGGTCAGCTTGCCATATCTTATGGGGCAAGGCGTTGTTATATAGCTAACTCAACTTATAATGGCGGACTTGCGGTAATGGAACTTTTACACGGATTAAACACAACAGTGGACCCTAGCGGTTTCGTCAAAGTGGCCTCACCTATAATTAAGGTATTCCGAGATGGGAGTTTTGAAACAAACGAGGAATCAGAAGGAGCTTCAGTGGAGAGGGTTTCTACTGGTGTTTATAAGGTATCAGGTGTGCTTGGCCTAAATTCTGACACTTCTTGGGGCGGTGTTAACGGTGGATTTGAGGTACCTGTAGACTTGAATAAGCAGCCTAGAATATGGCTAGATTACGAGGTTGAAGCTGATGGTTCAATAGTTGTTAAAACTTATCATCGCACTCACGATTCATCTCCGTCTTTCGCGAGAAATAAAATTGACGGCTTCAGTAACGGAGACCCTATAGATATACCTTCTGACTCGTTCGTTTCAATTCGAGTAAACATGCCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f15658552e696a69431562384db79e1d3800c0a399510aec91f73c5b80131be4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7697
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic analysis reveals CRISPR-Cas mediated host-pathogen interaction between enterotoxigenic Escherichia coli and phages Chakraborty,S., Begum,Y.A., Qadri,F. and Camilli,A. 2023 — GenBank