Protein

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Genbank accession
QMV28724.1 [GenBank]
Protein name
fibritin
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MEIIKPVLDDLKYTSDMPVAGSGQKQVEWIKNGEQLQGADPTIVGDKGGVLNRPSTQISANVETLDKNQETILSKMSEVIDKVNIHDDIINAGDGRDLYQRVGDLETEMDVHSGILEDIKETDVILDAKIQSISDNIGVGDPSLRFRTLRADDLHIKKMLGNYKDFDIDGVPSPGSLSSGVKGQIERNYNTGVNLDVRVTSLEKWWEDSTPASLREEVNQIRTELGQDPDPTRNIYSRISDLEMADETNSPLVQELVEHTGYGEFPLQYLDVQTDSYQTVGNLYDYSLHVKKDVDYISGIAKQTEGLSDDLARSLGSASDSTLDTTAWGRINDLRVRMENNEGILGSSPLDGLQGKVKEVDQREKEHFEDLDGRVSSISTTVNVEYRTSIEDLQNTVGNPNTGLVIKVEGTKNVADDDYRRIGSYQASKDMYEQMYRDYKNGAGYIPNPTETRLGAVWSREYDGANWVWRDLFTTNFVVGDNNKITAIDGTTLVSYSTGSDGKYIPTFGHNGTTKLRIVGDIIGNISLDTTSDIRKYGKTILGSTDQTIKVGQSDKNIVMVGKDIDSFKYNTPTGEFDVLHIGNYKKYITDVNPENGFTLNQNAVIGYAGADVIKLDNTTINIGSANTNLAFKGNVSELVMDQDKALKMNVGMGKHLNVVNNFGGILTYGDIETTNVFATDLYIQGTGVDRFKVWHQGMDAPADGSFYARKNNQWMVVEQGGSGTGIIGDAPQSGLAYARVNDDGVGFWQAVGERNITLAENVSIMAKTNSGTITAFTVDSATVTTRIGGTTGKINLRGTVSDFKLESKISTSYGSLLESTQTKIVIGDTTTPVNVYSTGNLFVGVGSDAKKVWTDAHDAPNNANFYARKGGQWTLIHDGIDPTKDVSVGETSDFIIGGYNVAKVDTVGVDKLMVIGDSRTFMKFDGKVTNLKLAEVGANNSFGITTQVNNVDKNIISISQPSTEKFITIGDTDLPVRITASEVTINNDKVLTKDSFEAPADGNKYVRQDGQWTRAYYYGDFATDAPTSPKEGDVFFEFIN
Physico‐chemical
properties
protein length:1041 AA
molecular weight: 113974,12270 Da
isoelectric point:4,69305
aromaticity:0,07781
hydropathy:-0,44774

Domains

Domains [InterPro]
G3DSA:1.20.5.320
STR
6–104
G3DSA:1.20.5.320 DC_0379 G3DSA:6.20.230.10 DC_0730
SSF58046
ATT
10–108
SSF58046 G3DSA:1.20.5.320
QMV28724.1
1 1041
Architecture
ATT
STR
ATT
STR
ATT 6-108 | STR 109-698 | ATT 699-719 | STR 720-1019 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QMV28724.1
1 1041
Domain Start End Length (AA) Confidence
N-terminal 1 460 460 0,9491
Central domain 461 673 214 0,7448
C-terminal 674 1041 367 0,3541
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-460
Central
461-673
C-terminal
674-1041

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage AP1
[NCBI] 		2759193 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Aeromonas hydrophila
[NCBI] 		644 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QMV28724.1 [NCBI]
Genbank nucleotide accession
MT713136 [NCBI]
CDS location
range 4681 -> 7806
strand -
CDS
ATGGAAATTATTAAACCTGTATTGGATGACCTGAAATATACTTCTGATATGCCTGTTGCTGGTTCTGGTCAAAAACAGGTTGAATGGATTAAAAATGGTGAGCAACTGCAAGGTGCGGATCCGACTATTGTTGGTGATAAAGGGGGCGTTTTAAACCGCCCCTCTACTCAAATTTCTGCTAACGTAGAGACATTGGATAAAAACCAAGAAACAATCCTTTCTAAGATGTCGGAAGTTATCGACAAGGTGAATATTCATGATGATATAATTAATGCTGGTGACGGACGAGATTTATATCAGCGAGTTGGTGATTTGGAAACCGAAATGGATGTCCATAGTGGGATCCTTGAAGATATCAAAGAAACCGACGTAATCCTCGACGCAAAAATCCAGTCAATTTCCGATAATATCGGAGTTGGCGATCCATCTCTTAGATTCCGAACTCTCCGAGCAGATGACCTTCATATCAAAAAAATGTTGGGTAATTATAAGGATTTTGATATCGATGGTGTTCCATCACCCGGCTCACTTTCTTCGGGGGTGAAAGGTCAGATCGAACGTAACTATAACACTGGTGTCAACCTTGATGTTCGTGTTACTTCTCTTGAAAAATGGTGGGAAGACTCAACTCCTGCATCTTTGAGGGAAGAAGTTAACCAGATTAGAACCGAACTTGGACAAGACCCGGATCCAACTAGGAACATTTATTCTCGTATCAGCGATTTAGAAATGGCTGATGAAACAAATTCACCTTTGGTTCAAGAACTTGTAGAACACACTGGGTACGGTGAATTCCCTCTTCAATATCTTGATGTACAAACCGATTCTTATCAAACCGTAGGTAATCTATACGATTATTCTTTACATGTCAAGAAAGACGTAGATTATATTAGTGGTATCGCCAAACAAACCGAGGGTCTGTCTGATGACTTGGCTCGCTCTCTTGGTTCGGCTAGTGATTCCACACTGGATACCACAGCTTGGGGTAGAATTAATGATCTACGTGTCCGTATGGAGAATAACGAAGGTATTCTAGGATCTAGTCCTCTAGATGGATTGCAGGGAAAAGTTAAAGAAGTAGACCAGAGAGAGAAAGAACATTTCGAAGATCTTGATGGTCGTGTTTCGAGTATATCAACTACTGTTAACGTCGAATATAGAACTTCTATTGAGGATCTACAAAATACCGTAGGTAATCCAAACACAGGTTTGGTTATCAAGGTAGAAGGGACAAAAAACGTCGCTGACGACGATTACCGTAGAATTGGTTCATATCAAGCATCGAAAGATATGTATGAACAGATGTACCGTGATTATAAGAATGGTGCTGGTTATATCCCTAACCCAACAGAAACTCGGCTTGGTGCTGTATGGTCGCGAGAATATGATGGTGCTAACTGGGTATGGAGAGATTTGTTTACCACTAACTTTGTGGTTGGTGATAACAATAAGATTACCGCCATCGACGGAACCACCCTTGTTTCTTATTCTACTGGTTCTGATGGGAAATATATCCCGACCTTTGGTCATAACGGAACAACCAAACTCCGTATAGTCGGCGACATTATCGGAAATATTTCTCTTGATACAACCTCTGATATCAGAAAATATGGGAAAACTATTCTTGGCTCTACCGATCAAACTATAAAAGTTGGTCAGAGTGATAAGAATATAGTTATGGTTGGTAAGGATATCGATTCTTTCAAGTATAACACACCAACCGGTGAATTTGATGTTCTGCATATTGGGAACTACAAAAAATATATCACCGACGTTAACCCAGAGAATGGATTTACCCTAAACCAGAATGCGGTAATTGGTTATGCAGGCGCAGATGTTATTAAATTAGATAACACTACAATAAATATTGGTTCTGCTAATACAAATCTCGCATTCAAGGGAAATGTTAGCGAATTGGTCATGGACCAAGACAAAGCGCTTAAGATGAATGTTGGTATGGGCAAACATCTAAACGTGGTCAATAACTTTGGTGGAATATTGACATACGGTGATATTGAAACTACTAACGTATTTGCAACGGACCTTTATATTCAAGGTACTGGGGTAGACCGGTTTAAGGTTTGGCACCAAGGTATGGATGCACCAGCAGATGGTAGTTTTTACGCTCGTAAGAACAACCAATGGATGGTTGTTGAACAGGGTGGTTCCGGTACTGGTATTATAGGTGATGCACCACAATCCGGATTAGCATACGCTCGGGTAAATGACGATGGTGTTGGTTTCTGGCAAGCTGTTGGCGAAAGAAATATAACCCTAGCAGAAAACGTATCTATAATGGCAAAAACCAATAGTGGTACTATTACTGCATTTACCGTTGACTCTGCAACCGTGACAACTAGGATTGGTGGAACCACAGGGAAAATAAACCTTCGTGGTACTGTATCCGATTTCAAATTAGAAAGTAAAATTTCTACATCTTATGGTTCTCTTTTAGAAAGTACCCAAACCAAAATAGTGATCGGCGACACAACCACACCAGTGAATGTATATTCTACTGGTAATCTGTTTGTTGGTGTTGGTTCTGATGCTAAGAAAGTTTGGACAGACGCACATGACGCACCAAACAACGCGAATTTCTACGCTCGTAAGGGTGGGCAATGGACTCTAATCCATGACGGTATAGACCCAACCAAGGATGTTTCTGTTGGTGAAACCAGCGATTTCATCATTGGTGGATATAACGTAGCCAAGGTGGATACAGTTGGTGTTGATAAGCTAATGGTTATTGGTGATAGTAGAACGTTCATGAAGTTTGACGGTAAGGTAACTAACCTCAAGCTTGCAGAAGTAGGTGCCAATAATAGTTTCGGTATTACCACACAGGTAAATAATGTCGATAAGAACATAATTAGTATATCGCAACCTTCTACAGAAAAGTTTATCACAATTGGTGACACCGATCTACCGGTTCGTATTACCGCATCTGAGGTAACAATCAATAACGATAAAGTCCTCACAAAGGATAGTTTCGAAGCACCAGCAGACGGAAACAAGTACGTAAGACAAGATGGTCAGTGGACAAGAGCGTATTACTACGGTGATTTTGCTACAGACGCACCGACCAGTCCTAAAGAAGGTGATGTGTTCTTCGAATTCATCAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
eb25fc79502d0a9255280a307a85b0fe213c27f82377c8540191504922556dab
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2913
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Aeromonas hydrophila phage AP1 Baliga,P., Puneeth,T.G., Shekar,M. and Girisha,S.K. 2022-01-07 — GenBank