Protein

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Genbank accession
XCO38169.1 [GenBank]
Protein name
long tail fiber protein proximal connector
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
Protein sequence
MANNEFMALFGPDSFTANVFSEANAVKYRLVVRGTNNDSAVNSVEVSINGADIINRRTQVARGINLAVIDGTTLALLDYKSFDMYGDPATNGNAIKDYLNSLPANRIVCFYTFDAIRSDDNFLATMRKIGSVAWPETRFFNIPITTTNYSHRSSYSAIYSSTMKKICMENFVGGSGTGLKDNTTSFVEVVFDEFSDIGVTGIPERMLDDPQTYSGNGYPFKAYGVWNVGSDVSRNDIFKITADIYIDQAARNAGAECYLYAFTHIASGQWISSTVLRTTGLAADTWHSVSGYYTIPDNADITRLGVSAYHYPSTVTTGQARCRNIQFCKVPREEVNRNGAAIGVNGIRMQTLSEVTDAGTVNPIEQLLSLPVSPVGVISDKKISSHNFAELDYIVSDPTEYTSTNTAEYQFKEWTATQQAAVTKASLSSYGIKPGDTIRMQCQMKRDANAIANNKGAYIVMQFWDANNTYISGINMRDVGTIPNVYSFYKNEGVIPAGAVTFDFGLYRYPNNTSTGSMSAKDVNLSIVR
Physico‐chemical
properties
protein length:529 AA
molecular weight: 58097,33250 Da
isoelectric point:5,41968
aromaticity:0,10964
hydropathy:-0,20718

Domains

Domains [InterPro]
DC_0004
STR
1–529
DC_0004
PS52031
LEC
24–206
PS52031
IPR039477
STR
62–132
IPR039477
XCO38169.1
1 529
Architecture
STR
STR 1-529
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XCO38169.1
1 529
Domain Start End Length (AA) Confidence
N-terminal 1 49 49 0,2521
Central domain 50 248 200 0,6211
C-terminal 249 529 280 0,4350
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-49
Central
50-248
C-terminal
249-529

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage phi1_146015
[NCBI] 		3232196 Viruses >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCO38169.1 [NCBI]
Genbank nucleotide accession
PP889466 [NCBI]
CDS location
range 42379 -> 43968
strand +
CDS
ATGGCGAATAACGAATTTATGGCGTTATTCGGCCCTGATAGTTTCACGGCGAATGTGTTTTCAGAAGCAAACGCCGTGAAATATCGCCTTGTTGTCCGTGGAACGAATAACGATTCTGCGGTCAACTCGGTTGAGGTATCTATTAACGGGGCTGATATTATTAACAGGCGGACACAAGTTGCTCGCGGAATTAACCTGGCAGTCATTGATGGAACAACTTTAGCATTATTGGATTACAAATCATTTGATATGTATGGTGATCCTGCTACGAACGGGAATGCGATTAAAGACTACCTGAATTCACTTCCAGCGAACAGAATTGTGTGTTTTTATACTTTCGATGCGATCAGAAGTGATGATAACTTTTTAGCGACAATGAGGAAAATTGGTTCTGTTGCGTGGCCCGAAACTCGGTTCTTTAATATCCCGATCACCACAACCAACTATTCTCACCGTTCATCCTATTCAGCTATCTATTCATCAACGATGAAAAAGATTTGCATGGAAAACTTTGTCGGTGGTTCTGGTACGGGGTTGAAAGACAATACAACGAGTTTTGTTGAAGTTGTGTTTGATGAATTTAGTGATATCGGGGTAACTGGTATTCCTGAAAGAATGCTGGATGATCCTCAAACGTATAGCGGTAATGGTTATCCATTCAAAGCATACGGGGTTTGGAACGTTGGGAGTGATGTTTCTCGTAATGATATTTTCAAAATCACTGCGGACATCTATATCGATCAGGCTGCACGTAATGCGGGGGCAGAATGTTATCTGTATGCCTTTACTCATATTGCGTCTGGACAGTGGATATCATCAACAGTTCTTAGAACAACTGGACTTGCTGCGGATACATGGCATTCGGTATCGGGATATTACACTATTCCAGATAATGCTGATATAACTCGTTTGGGTGTTTCTGCTTATCATTATCCGTCAACAGTTACCACTGGTCAGGCCCGATGTCGAAATATCCAATTCTGTAAAGTCCCTCGCGAAGAGGTGAACAGAAACGGGGCGGCTATCGGTGTCAACGGTATTAGGATGCAAACACTTTCCGAAGTCACTGATGCTGGAACCGTAAACCCGATTGAACAATTGCTTTCTCTGCCTGTTTCGCCTGTTGGGGTTATCAGTGACAAGAAAATTAGTTCGCATAACTTTGCTGAACTTGATTATATTGTTTCTGATCCGACTGAATATACTTCTACCAATACAGCGGAGTACCAGTTCAAAGAATGGACTGCTACCCAGCAAGCGGCGGTAACGAAAGCATCACTAAGCAGTTATGGAATAAAACCTGGTGATACGATCCGTATGCAATGCCAAATGAAACGCGATGCAAACGCAATCGCTAACAATAAAGGTGCATATATCGTAATGCAGTTCTGGGACGCGAATAATACGTATATTTCAGGGATCAACATGCGTGATGTTGGTACGATACCTAACGTATATTCATTCTATAAAAACGAAGGGGTTATTCCTGCTGGTGCGGTTACGTTTGATTTCGGTTTATATCGTTATCCAAACAACACAAGCACAGGTTCGATGTCCGCTAAAGACGTTAATCTGTCAATCGTGAGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
98f9d2905507a1bcfee4c3bc38c1ba8c6810a500ca18e837d6fc25fd0df81e50
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6430
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The complete genome of Klebsiella pneumoniae phages Fang,Q., Luo,H., Feng,Y. and Zong,Z. 2016-02 — GenBank