Protein

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Genbank accession
UPT53300.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MAGIQPEGGVPPQQTLGGLTNPDLAAGCENLWYSIRCNPRFDPVAANFVIAEILNLVNECRPYNCNTNNNMLLAVQCIARRVIFDCLEEELPVAEDACSIEQLVLTTDATGCQRIARYTAAAAQLVAVTSASVYGPDHNVTIPANANDPATYYSFNELSSDVENNTVNTTMLNQQKVFEATFSLPCFTNLEIETLLSPLFEPAANGGEGRAGQLVFRVDGVFELTSAGFIRYSDNFFTNFNSASRSQFTLGLGAGAHTIEAFWVHRTGLSGADQGAPINLTRIGANGSVNNGMFIRTALT
Physico‐chemical
properties
protein length:300 AA
molecular weight: 32276,82490 Da
isoelectric point:4,52338
aromaticity:0,08667
hydropathy:0,00433

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage Yong-L2-223
[NCBI] 		2928845 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp. PCC 7002
[NCBI] 		32049 Cyanobacteriota > Cyanophyceae > Chroococcales > Geminocystaceae > Picosynechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UPT53300.1 [NCBI]
Genbank nucleotide accession
OM868081.1 [NCBI]
CDS location
range 24350 -> 25252
strand +
CDS
ATGGCAGGCATTCAACCCGAAGGCGGGGTACCCCCGCAGCAGACACTGGGCGGGCTGACGAACCCCGACCTTGCAGCAGGCTGTGAGAACCTCTGGTACTCTATCCGCTGCAATCCGCGCTTCGATCCAGTTGCGGCAAATTTTGTGATTGCCGAAATCCTCAATCTGGTCAACGAGTGTCGGCCGTACAACTGCAACACGAACAACAACATGCTCTTGGCGGTTCAGTGCATCGCAAGGCGCGTGATTTTCGATTGCCTCGAAGAAGAGCTCCCCGTTGCTGAGGACGCGTGTTCGATCGAGCAGCTCGTGCTGACAACCGATGCCACGGGGTGTCAGCGTATTGCACGCTATACCGCGGCTGCGGCACAGCTCGTCGCCGTCACGTCGGCAAGCGTCTATGGCCCTGACCACAACGTCACGATTCCCGCGAACGCGAACGATCCTGCAACGTACTACTCGTTTAACGAGCTGTCGTCCGACGTTGAGAACAACACTGTCAACACGACGATGCTGAACCAGCAGAAAGTGTTTGAGGCGACGTTCTCGCTGCCCTGCTTCACCAACCTCGAGATCGAGACGCTCCTTTCTCCCTTGTTTGAACCTGCGGCGAATGGTGGTGAGGGGCGCGCGGGGCAGCTCGTGTTCCGGGTTGACGGTGTGTTTGAGCTGACATCAGCGGGCTTCATCCGTTACTCGGACAACTTCTTCACCAACTTCAACAGTGCGTCAAGGAGTCAGTTTACGCTGGGTCTCGGTGCCGGTGCGCACACCATCGAAGCGTTCTGGGTACATCGTACCGGTTTGTCGGGTGCCGATCAAGGTGCACCGATCAATCTGACCCGCATTGGCGCAAATGGTTCCGTTAATAACGGGATGTTCATTCGCACCGCGCTCACGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
aa41032b7c24a75ba4ff5165be9cca2fed6daf6c80969537071a45281b76b89a
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,6903
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic analysis of Synechococcus cyanophage Yong-L2-223 Pan,L., Li,D., Lin,W., Qu,C., Cai,R., Qian,M., Wang,F., Zhou,Q., Liu,W. and Tong,Y. 2024-11 — GenBank