Protein

View in Explore
Genbank accession
XZP17270.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,85
Protein sequence
MSLAQRLSALAQAIAQDVKNIILNYRLKTDLYEEKTTAVTVAPSTFDQVKQARWLKATWAPSSASNGGVVAADFVDMIFNGANGSVTGGGHYVGRFTYLQAIGGGALDQGFLEEHRVGVRNSTTVNTVIGRKWVIDKNSEASGTIGKLALEVFDDMRADVSYVQRFTREFLDPRMVTLHAGGVIQTGVIIGDETTTVSIADYWSGKSVYLNSARNRTLSVPASITEGFSLKLIQGSLGGKWSITAPGRTILSNTGATATVNAYDIVTLKVYPGGIVWLEFEANPATSYDTSKVVPITNGGTGAKSAAAARSNLFDTRLQNFSSLSGGVDQLPYQTGANTWAQTPLTSVGRGVLGGSTVANVLSYLGGVPKSLASNRTVSDPNTVPDECGFYSIGSSPWSNLPAGVDSLNPIGSMLYHHPYDAATAVQMLVVRTSNLMYFRRRAAGSWQAWNRVLSDTQLLGTVDQTGGVPVGSVIERGSNSNGQYVRFADGTQICIISLLGANDRTAGVGYTLTLPVSFTPDWTVGVSVSWVSHASNPSTYNGTRVAYANGNALTFILSENLTTNRLIFTCIGRWF
Physico‐chemical
properties
protein length:576 AA
molecular weight: 61390,28540 Da
isoelectric point:8,76191
aromaticity:0,09028
hydropathy:-0,02031

Domains

Domains [InterPro]
DC_0857
STR
195–576
DC_0857
cd19958
STR
377–453
cd19958
XZP17270.1
1 576
Architecture
STR
STR 195-576
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage Isf1
[NCBI] 		3433624 No lineage information
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XZP17270.1 [NCBI]
Genbank nucleotide accession
PV664360.1 [NCBI]
CDS location
range 62400 -> 64130
strand +
CDS
ATGAGCCTCGCACAACGTCTATCAGCACTAGCCCAGGCGATAGCTCAGGATGTAAAAAACATCATCCTTAACTATCGTTTGAAGACCGATCTGTACGAGGAGAAGACTACTGCGGTAACAGTGGCACCTTCTACTTTCGACCAAGTTAAGCAGGCTCGATGGCTAAAGGCGACCTGGGCGCCCTCTTCTGCCAGCAATGGAGGGGTAGTAGCTGCTGACTTTGTAGATATGATCTTCAACGGGGCTAACGGAAGCGTAACTGGGGGCGGCCACTACGTTGGCCGCTTTACCTATTTGCAAGCGATTGGCGGCGGCGCGCTCGATCAAGGCTTTCTCGAAGAGCATCGAGTAGGCGTCCGCAACAGCACTACGGTAAACACGGTCATAGGACGTAAGTGGGTTATCGATAAGAACTCGGAAGCTAGCGGTACTATAGGCAAGTTGGCGTTGGAGGTATTCGACGACATGCGTGCTGATGTCAGTTACGTGCAGCGATTCACTCGCGAGTTCTTAGACCCGCGTATGGTTACGTTACATGCTGGTGGGGTAATACAGACTGGAGTCATCATAGGGGACGAAACTACAACAGTCTCCATTGCTGACTATTGGTCAGGTAAGTCTGTCTACCTCAATAGTGCCAGGAATCGAACTCTATCGGTACCTGCCTCGATCACTGAAGGTTTCTCTTTGAAGCTGATCCAGGGATCGTTAGGTGGTAAATGGTCGATCACCGCTCCGGGCCGTACGATTCTGTCTAACACTGGAGCAACAGCGACTGTTAACGCCTACGATATAGTCACCTTGAAGGTCTACCCCGGAGGGATAGTGTGGCTAGAGTTCGAGGCTAATCCGGCCACCAGTTACGACACTTCCAAGGTTGTGCCGATTACTAATGGCGGTACTGGCGCTAAGAGTGCCGCTGCCGCGCGGTCGAATCTATTCGATACCCGTTTGCAGAACTTCAGTTCGCTATCGGGTGGCGTTGACCAACTCCCATATCAGACTGGGGCCAATACCTGGGCGCAGACCCCTCTCACCTCGGTAGGGCGGGGCGTTTTAGGTGGAAGTACAGTTGCTAACGTCCTTTCTTACCTTGGCGGCGTACCCAAAAGTCTAGCGTCTAACCGGACGGTCTCCGACCCGAATACTGTGCCGGATGAGTGTGGTTTTTACAGCATAGGTTCGAGCCCGTGGTCTAACTTACCGGCGGGCGTAGACTCTCTGAACCCCATAGGTTCAATGCTGTATCACCATCCGTACGATGCAGCTACCGCAGTTCAAATGTTGGTGGTTCGTACATCTAACTTGATGTACTTCCGACGGCGCGCGGCTGGGTCGTGGCAGGCGTGGAACCGTGTTTTGTCGGATACTCAGCTACTCGGTACTGTCGACCAGACTGGAGGCGTTCCTGTAGGTTCCGTGATAGAGCGTGGTAGTAACTCTAACGGCCAGTATGTTCGTTTTGCTGATGGGACTCAGATTTGCATAATTAGCTTGCTAGGGGCGAATGACCGGACTGCTGGCGTAGGCTACACGCTCACGTTGCCTGTATCTTTCACTCCAGATTGGACCGTGGGGGTATCGGTGTCCTGGGTGTCGCACGCATCGAACCCGTCAACATACAACGGCACGCGTGTTGCTTATGCTAACGGTAACGCCTTGACGTTTATACTCTCTGAGAACCTGACAACTAACCGATTAATTTTTACCTGCATAGGAAGGTGGTTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
70c91e2c962d871f529951117a93be4ca4cf4be28c9776ab56de64181a8d5e50
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7398
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50