Protein

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Genbank accession
YP_008130079.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MAKQGILAKSKPSAATNTLLYSAPIDASASTVLTVNEQGGSGTTYDVALKNYDQKMTLGASNYKLHTGDVVTGYRMTLNTPLPASAGLSAGTTLTSISGEASFNFESFYLPAFTEIVVKVRAIRALTLESTSGTFAVGETFSTGTAPNATTATIYAATEGSGTYTVYIGPSTINGSGAEFAAGDSVSSSGSATGTISTGGIGAAVNEFTFTESGGTEDLYLGTVLTVFIDRVYRFNVADSSLSGLDFSLSTVVNGEWGPDGTAGNSDDGTEYTTGKTTNGTPGSSGAYIQYDFTQDTNLSGSLYVYEGTTGTAANSAFGGSDRYLTTSDSFQYSELYVYDIDGTWTNSTDSFLFNGVTYTITAQTAGAYGYIRSYSGTTAYVVKGNGSADFTTSSTFQDNPKLSGAARTAVTVSSIDVATTAVEAQEYLRKDNTLAADSAEEIKSLVIGPGERLIVECAAAEANFVLIGFEDSSTGFTTRTYASAAASSSASG
Physico‐chemical
properties
protein length:493 AA
molecular weight: 50826,65540 Da
isoelectric point:4,24698
aromaticity:0,10345
hydropathy:-0,08357

Domains

Domains [InterPro]
DC_0373
STR
1–485
DC_0373
YP_008130079.1
1 493
Architecture
STR
STR 1-485 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Prochlorococcus phage P-SSM3
[NCBI] 		536453 Uroviricota > Caudoviricetes > Pantevenvirales > Ronodorvirus > Ronodorvirus pssm3
Host Prochlorococcus marinus str. NATL2A
[NCBI] 		59920 Bacteria > Cyanobacteria > Prochlorales > Prochlorococcaceae > Prochlorococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_008130079.1 [NCBI]
Genbank nucleotide accession
NC_021559.1 [NCBI]
CDS location
range 101842 -> 103323
strand +
CDS
ATGGCTAAACAAGGAATTTTAGCAAAATCAAAACCTAGTGCTGCTACGAATACGTTATTGTATTCAGCACCCATTGATGCATCTGCAAGTACAGTTCTAACTGTAAATGAGCAAGGTGGATCAGGAACTACGTATGATGTTGCTCTAAAAAATTATGATCAAAAGATGACTTTAGGTGCATCTAACTATAAACTGCATACAGGTGATGTAGTGACAGGTTATAGAATGACGTTAAATACACCACTCCCTGCCTCAGCAGGATTATCAGCAGGTACAACTCTCACATCTATTTCGGGAGAAGCATCATTTAACTTTGAATCATTTTACTTACCTGCTTTTACTGAGATTGTTGTCAAAGTCAGAGCAATTCGTGCCTTAACATTAGAATCCACTTCGGGTACATTTGCTGTAGGAGAGACATTCAGCACAGGAACAGCACCTAACGCTACAACTGCAACGATATATGCAGCAACTGAGGGATCAGGAACATATACAGTTTATATTGGACCTTCTACTATCAACGGATCTGGAGCAGAATTTGCTGCAGGTGATAGTGTATCATCATCTGGATCTGCAACTGGTACTATATCTACTGGTGGTATCGGTGCTGCAGTAAACGAGTTTACATTTACAGAGTCAGGTGGAACAGAAGATCTATACTTAGGAACTGTACTAACAGTATTCATTGATAGGGTATATCGTTTTAATGTAGCAGATTCATCATTATCTGGTCTTGACTTTAGTTTATCTACAGTTGTTAACGGAGAATGGGGACCTGATGGTACAGCAGGGAACTCTGATGATGGTACTGAATATACTACAGGTAAGACAACTAACGGAACTCCAGGTTCTAGTGGTGCATATATTCAATATGATTTTACACAAGATACGAACCTGAGTGGTAGTTTATATGTCTATGAGGGAACTACTGGTACTGCAGCAAACTCAGCATTTGGTGGTTCTGATAGATATCTAACAACTTCAGATTCTTTCCAATATTCTGAGTTGTATGTTTATGATATTGATGGTACATGGACAAACTCCACAGATAGTTTCTTATTCAATGGTGTGACATATACTATTACTGCTCAAACTGCAGGAGCATACGGATACATCCGTAGTTATTCTGGTACAACTGCATATGTAGTTAAAGGAAATGGATCTGCTGATTTTACAACCAGTAGTACATTCCAAGATAATCCTAAATTATCTGGTGCAGCAAGAACTGCAGTGACTGTAAGTAGCATTGATGTTGCAACAACTGCTGTAGAAGCACAAGAGTATCTTCGTAAAGATAATACACTTGCTGCAGATAGTGCAGAAGAAATTAAATCATTAGTAATTGGTCCTGGCGAGAGACTGATTGTTGAATGTGCAGCAGCAGAAGCAAACTTTGTTCTCATTGGATTTGAAGATTCATCTACTGGATTCACAACAAGAACATACGCATCAGCAGCAGCATCTAGCTCTGCATCGGGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c99587c7c74a7a6484c86e2c45b32389c5763decad120ee02e882c2f1880f227
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4708
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Prochlorococcus phage P-SSM3 Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank