Protein

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Genbank accession
QPL12247.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MTLTYDVSDALHAVDMNQLYSLLRGTAHVEGGPVQLSESGGDKIVTAPTPWSVMINGSIVAVDDTNSGNEAVLPPPEDTQDRWDLIYVDASGVLQVAQGEPGAVRGERGRAALSPSPPPAASLNGVAVALAYRQYDEDETPAFSLGQLFYDRRVRSAADLHEISVYEATVENAPTADEDVVRKLELDALQADRDATQSELDGHKSATTAHGSDGVVMGANDVDSEIATHTNDPNAHHSRDHAARHENGGADEINVDGLSGRLAWRQNPTNHSNRHENGGGDELDAGDLAGNSGSSGQFLATDGSSAYWTGTPTGITAADITHETGNFTDSGSQGTRTTSITFSSNFSVITGASSGGVASYGGDSANLGTSIISIDTNGMTIEHIAGYNTDMTVTWNVWGPV
Physico‐chemical
properties
protein length:401 AA
molecular weight: 41949,67520 Da
isoelectric point:4,36713
aromaticity:0,05486
hydropathy:-0,43242

Domains

Domains [InterPro]
Coil
Unmapped
186–206
Coil
QPL12247.1
1 401
Architecture
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QPL12247.1
1 401
Domain Start End Length (AA) Confidence
N-terminal 1 275 275 0,9477
Central domain 276 390 116 0,0170
C-terminal 391 401 10 0,9972
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-275
Central
276-390
C-terminal
391-401

Taxonomy

  Name Taxonomy ID Lineage
Phage Halorubrum phage Hardycor1
[NCBI] 		2793710 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QPL12247.1 [NCBI]
Genbank nucleotide accession
MT152698 [NCBI]
CDS location
range 20554 -> 21759
strand +
CDS
ATGACACTCACCTATGACGTAAGCGACGCACTACACGCCGTCGACATGAACCAATTGTATAGCCTACTCCGGGGGACCGCACACGTTGAGGGCGGCCCGGTTCAACTATCGGAGAGCGGCGGCGATAAGATAGTGACCGCGCCTACGCCGTGGTCGGTCATGATCAACGGTTCGATCGTCGCCGTCGACGACACGAACTCGGGGAACGAGGCCGTACTACCGCCGCCCGAGGACACACAAGATCGTTGGGACCTGATATACGTCGACGCGAGCGGCGTCTTACAGGTCGCGCAGGGCGAGCCGGGTGCGGTGCGGGGCGAGCGGGGACGAGCCGCGCTCTCGCCCTCACCGCCGCCTGCGGCGTCGTTAAACGGCGTCGCCGTCGCCCTCGCTTATCGCCAATACGACGAGGACGAGACCCCGGCGTTCTCGCTCGGTCAACTATTTTACGACCGGCGAGTGCGATCGGCGGCCGACCTACACGAGATAAGCGTGTACGAGGCGACCGTCGAGAACGCGCCGACGGCCGACGAGGACGTAGTTCGGAAACTCGAACTCGACGCCTTACAGGCCGACCGAGACGCGACTCAAAGCGAACTCGACGGCCATAAGTCGGCCACGACGGCACACGGGAGCGACGGCGTCGTAATGGGTGCGAACGACGTGGATAGCGAGATAGCAACTCACACGAACGATCCCAACGCTCACCACTCTCGGGACCACGCGGCCCGGCACGAGAACGGCGGGGCCGACGAGATAAACGTCGACGGTCTCTCGGGCCGCCTCGCGTGGCGGCAGAACCCGACCAACCACTCAAACCGACACGAGAACGGCGGGGGGGACGAACTCGACGCCGGGGACCTCGCAGGAAATAGCGGTTCGAGCGGTCAATTCCTCGCGACGGACGGGAGTTCCGCATATTGGACGGGCACGCCGACGGGGATAACCGCCGCAGATATTACCCACGAGACCGGGAATTTTACAGATAGCGGGAGCCAAGGCACAAGAACGACGAGTATAACATTTTCGAGCAATTTTTCGGTGATCACGGGGGCTTCCTCCGGGGGGGTCGCGAGTTATGGCGGAGACTCCGCAAATTTAGGCACATCTATCATAAGTATAGACACAAATGGTATGACAATCGAACACATAGCCGGTTATAACACAGACATGACCGTTACATGGAACGTATGGGGTCCCGTATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
32d90159d4a96746db7056a8f743cecdd4264b79e32bfaed4cca05dd237dec7a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6889
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Novel Halovirus Hardycor1, and the Presence of Active (Induced) Proviruses in Four Haloarchaea Dyall-Smith,M., Pfeiffer,F., Chiang,P.-W. and Tang,S.-L. 2021 — GenBank