Protein

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Genbank accession
ASV43781.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MAKIVLSDVTSGSSVTINRNFQKIEDALNDEVLFRDNPEGEPNQMESDLDMNSNDILNAGVIKAKRVIADSIDNNTESLIDGGVSDNEIVKWDVDTSKFVGTGVFSNSEGELDVSSNSVSVGVHKIGSMGENVGFFNKATGKSYFPSWQGVGISDSDTFTAVTRVHGPLEYVVRTTNVSEVLINPEFIVTVPYSETVFKIGLYCTNEVPNVHFRLTYNNSIVFDGDMGSSQSVGMTTFTLPTPVDLRQGAVLVAKAYGIGQDLYVKGGSDGVPAYSLWMRPWVDKELATVEYVDGKPQGKETFVELLDCPNTYVGQGKKLVAVNESESALEFIPHTLESLDNVLIVSPIQTDGEVLMYNLTENRWENQALPEFQEDIIRISYTTPNSLPAKQLLSTSNVGSVITFNVTEIASDFVQTDLTSGVLTFVDSAKAMFTMSVQVIRETGGAGDALWGMYVETSMDGISWSPVSGTTRLLLLTGGDSGDVKLIDYTVPISVVAGEKVRFKQYTSDSSKQIGIISSPQTIAGIPTNAGVTLGVYRVQH
Physico‐chemical
properties
protein length:542 AA
molecular weight: 58722,18700 Da
isoelectric point:4,45603
aromaticity:0,08118
hydropathy:-0,07638

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage JSF23
[NCBI] 		1983603 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio cholerae
[NCBI] 		666 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ASV43781.1 [NCBI]
Genbank nucleotide accession
KY883657.1 [NCBI]
CDS location
range 41418 -> 43046
strand -
CDS
ATGGCTAAGATTGTTCTGAGTGATGTTACCTCCGGTTCTTCTGTGACAATTAATCGTAATTTCCAGAAGATTGAGGACGCACTCAATGATGAGGTTCTATTCAGGGATAACCCAGAAGGTGAACCAAACCAAATGGAAAGTGACCTAGATATGAACTCAAATGACATTCTCAATGCTGGTGTTATTAAGGCGAAGCGTGTTATTGCCGATAGCATTGACAATAATACAGAATCTCTAATTGATGGTGGAGTTTCTGACAATGAGATTGTTAAGTGGGATGTGGATACCTCGAAATTCGTGGGCACTGGTGTATTCTCCAATTCTGAGGGTGAACTCGATGTTTCATCTAACTCAGTGTCAGTGGGTGTACACAAAATCGGTAGTATGGGAGAGAACGTAGGGTTCTTTAACAAGGCCACAGGAAAATCTTATTTCCCATCTTGGCAGGGTGTGGGTATTTCTGACAGTGATACTTTTACCGCTGTTACGCGAGTGCATGGCCCTCTCGAATACGTGGTTAGAACTACAAACGTATCTGAGGTTCTAATCAACCCTGAATTTATCGTAACTGTTCCATACAGTGAGACTGTGTTTAAAATCGGATTGTATTGCACTAACGAGGTTCCTAACGTACATTTCAGACTAACGTACAACAACTCTATCGTGTTTGATGGAGATATGGGAAGCAGCCAATCTGTAGGAATGACTACCTTCACTCTACCGACTCCTGTTGATTTACGACAAGGCGCAGTTCTAGTTGCAAAAGCTTACGGAATCGGACAAGACTTGTACGTTAAAGGCGGCAGTGATGGTGTCCCAGCCTACTCTCTATGGATGCGTCCTTGGGTAGATAAGGAACTAGCAACTGTTGAGTATGTTGATGGAAAGCCTCAAGGTAAAGAGACTTTCGTAGAGTTGTTAGATTGCCCAAACACTTACGTAGGGCAGGGTAAGAAACTAGTGGCGGTTAACGAATCTGAGAGTGCTTTAGAGTTTATCCCACACACTCTAGAGTCATTAGATAATGTGCTAATCGTTTCTCCTATCCAAACGGATGGTGAAGTGTTGATGTATAACCTCACAGAAAATCGGTGGGAAAACCAAGCCTTACCGGAGTTCCAAGAGGACATTATAAGAATCAGCTACACTACTCCTAATTCCTTACCGGCTAAACAACTGTTGAGTACATCAAACGTTGGTTCTGTAATTACTTTCAACGTTACGGAGATTGCCAGTGATTTTGTACAAACAGACCTAACATCTGGAGTACTAACTTTCGTCGATAGTGCGAAAGCAATGTTCACTATGTCAGTACAGGTCATTCGAGAAACGGGAGGTGCTGGAGATGCGTTGTGGGGAATGTATGTAGAAACATCAATGGATGGTATCTCATGGAGTCCGGTGTCTGGAACTACAAGATTGCTGTTACTGACTGGTGGTGATTCCGGTGATGTTAAACTCATTGATTACACTGTTCCAATAAGTGTCGTAGCTGGTGAGAAAGTACGATTCAAACAGTACACATCTGACAGCTCCAAACAGATTGGAATCATCAGTAGTCCTCAAACGATTGCTGGAATCCCAACAAATGCTGGTGTCACTTTAGGTGTATACCGAGTACAACACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1a1c4d1957f44e6e099f8bd74ee1701d816dd5a599462c9d330ffecba488f023
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6755
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50