Protein

View in Explore
Genbank accession
QMV32866.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 0,93
TF
Evidence RBPdetect
Probability 0,86
TF
Evidence RBPdetect2
Probability 0,87
Protein sequence
MTESLNSRVAKFDEIVTNVDTWVKGGSADTVDFGGGPVDSPAKLIEGQRTDIAAAAAALISQKDEQINQQANGVLAQANAAASNANGSAGAAAASAAASASASAASAADAAASSAQKFVTSAGAANQKPNTSYTYINPLSRVCTITGGGDGSNFQMIGYGHNRQKFLGAATTGVWNYLPANGIANLSFYKKAGDGTRTKLTYTSGAPTGNQWTGVVGASSVSWTLGTALGVLEQLYIEDPYAVIATTGTQPDYSWIGGGYDNVVDRGVMQHVTGAHNRVLDGDHTTMLGGSYHTNDGGSYNAFCGGTDNWNGSGATLGSGHFGGLRNYCNGATSGTTFAQSCKVNSAYSWTHGYLNTINGTACSVGGRNNTASGSDSAVFGNGNTSTANYSFAIGNGNTVGHHYARSLGGYKGSTLYQGELLVWAYRDTSVGTNPFVSRRQVPLSAVTSTVSSSYLATLDNITGISLPASTAWKCTLEVWARSAALRSAAWELKFRAHTDASGNLTIGTVTTVWSDVDANFGTGANVATVSVAVSSNQLNFVIQPRIDSPVGAKWGAVLHINEVN
Physico‐chemical
properties
protein length:565 AA
molecular weight: 58112,99960 Da
isoelectric point:6,40481
aromaticity:0,08673
hydropathy:-0,16000

Domains

Domains [InterPro]
DC_0261
STR
1–314
DC_0261 IPR011049
IPR011049
STR
318–460
IPR011049
DC_0296
RBD
430–565
DC_0296
QMV32866.1
1 565
Architecture
STR
STR
RBD
STR 1-314 | STR 318-460 | RBD 461-565
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QMV32866.1
1 565
Domain Start End Length (AA) Confidence
N-terminal 1 116 116 0,9052
Central domain 117 399 284 0,8627
C-terminal 400 565 165 0,9795
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-116
Central
117-399
C-terminal
400-565

Taxonomy

  Name Taxonomy ID Lineage
Phage Ralstonia phage Dimitile
[NCBI] 		2759723 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QMV32866.1 [NCBI]
Genbank nucleotide accession
MT740733.1 [NCBI]
CDS location
range 24157 -> 25854
strand +
CDS
GTGACCGAATCACTGAACAGCCGCGTCGCCAAGTTCGACGAGATCGTCACCAACGTTGACACGTGGGTGAAGGGCGGGAGCGCCGACACCGTTGATTTCGGTGGCGGCCCGGTCGATTCGCCCGCAAAGCTCATCGAGGGCCAGCGAACAGACATCGCTGCTGCTGCTGCGGCGCTGATCTCGCAGAAGGACGAGCAGATCAACCAGCAGGCGAACGGCGTGCTGGCGCAGGCGAACGCGGCGGCCAGCAATGCAAACGGAAGCGCTGGCGCGGCGGCGGCGAGTGCGGCGGCATCTGCCTCCGCCAGCGCCGCCAGCGCAGCAGATGCCGCAGCATCGTCGGCCCAGAAGTTCGTGACGTCGGCCGGTGCGGCGAACCAGAAGCCGAACACGTCCTACACCTACATCAACCCGCTGTCGCGCGTGTGCACCATAACCGGCGGCGGCGATGGGTCGAACTTCCAGATGATCGGGTACGGCCACAACCGCCAGAAGTTTCTGGGCGCGGCCACTACTGGCGTCTGGAACTACCTGCCTGCCAATGGCATTGCCAACCTGTCTTTCTACAAGAAAGCGGGAGATGGCACCCGCACAAAGCTGACGTACACGTCCGGCGCTCCGACCGGAAACCAGTGGACAGGCGTTGTTGGTGCAAGCAGCGTCTCCTGGACGCTCGGCACAGCCCTTGGCGTGTTGGAGCAGCTGTACATCGAAGACCCGTACGCGGTGATCGCGACGACAGGCACGCAGCCGGACTACTCCTGGATCGGTGGCGGCTACGACAACGTGGTCGATCGCGGCGTGATGCAGCACGTCACGGGCGCGCACAATCGCGTGCTCGACGGCGACCACACCACGATGCTGGGTGGCAGCTACCACACCAATGACGGGGGCAGCTACAACGCATTCTGCGGTGGCACCGACAACTGGAATGGATCGGGCGCTACGCTGGGCAGCGGGCACTTCGGCGGGCTGCGCAACTATTGCAACGGCGCCACCTCTGGCACGACGTTCGCGCAGTCCTGTAAGGTGAACTCGGCGTACAGCTGGACGCACGGTTACCTGAACACCATCAACGGCACGGCATGCTCGGTCGGCGGGCGCAACAACACCGCGTCCGGCTCGGACTCGGCCGTCTTCGGCAACGGCAACACCAGCACCGCGAACTACTCGTTCGCCATCGGCAACGGCAACACGGTCGGCCATCACTACGCCCGCAGTCTGGGCGGGTACAAGGGCAGCACGCTGTATCAGGGCGAGCTGCTGGTCTGGGCGTACCGCGACACGTCGGTCGGCACGAACCCGTTCGTGAGCCGCCGGCAGGTCCCGCTGTCCGCAGTGACCTCTACTGTCAGCTCGTCCTACCTCGCCACGCTCGACAACATTACTGGCATCAGTCTTCCAGCCAGCACGGCATGGAAATGCACCCTGGAGGTATGGGCGCGCAGCGCGGCGCTGAGGTCAGCGGCCTGGGAGCTGAAATTCCGAGCGCACACAGATGCCTCCGGCAACTTGACGATCGGCACTGTGACCACGGTGTGGTCCGACGTTGATGCGAACTTCGGCACGGGCGCCAACGTAGCGACGGTTTCTGTAGCGGTATCGAGCAATCAGCTCAATTTCGTGATCCAGCCACGGATCGATTCTCCTGTCGGCGCAAAGTGGGGTGCCGTGTTGCACATCAACGAGGTGAACTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
d9e89a7aa6e7cfdcf77042689605e4ed2cc847eb97d60537ac1a273c898c81b7
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7631
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Ralstonia phages Trotereau,A., Boyer,C. and Torres-Barcelo,C. 2021-03-08 — GenBank