Protein

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Genbank accession
XOD41408.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MFELLLSAAGQAKPVEMIPYNQPTLFGQLDVGLVGSVPYFRNGLLNINSGAPSRSTTDNKIRIFDSTGTQISKTAVQNSYSLCHTAGVFVPTSDRLYMFGGRRGASWTQNVITMINPTVPNDNLISNQLMNTSTYNSIGDWDGGEFIWVLEHATDLLIRYRLSNNVREVMSARCPVILSGAYAFCHKGNFYVMGGWKNISGSWVVNQDVYKYTVAINTWTLYHSYSTDYHGGHQGGKYWNGTFNYTIVKDGKIHCVRYYIAEKQFVVTETNIGEVHGTSVALNPSNGDLYLIGGSDIVIDDALFNTPERTKAAIYKFTIPIPPSKTEWEVMANAPYDSRGSTAVVIDDELYMFGGYTSTGAYRGAFNKYNPETNTWNGLFTGSGLSPSARANMCAAANDTHMYLFSGSNQSADFWRYNVATNDWTAITPASPGSSNPVFRTQATMVHYNGKLYLLGGNNESDALFVYDIASNMWSKRVAQGGIQRSSHRAVVVGEYMYVYGGFVNGSQSGRFDRMNMNTFAWESLPTTDGPGVNSYGVMLTNDEEIIYIGGVDEDKRRKANAYNIQSRTWRKLPELPNGVNDGYGGFINGTAYVGGGLTGASNNTITDKFYRLGI
Physico‐chemical
properties
protein length:615 AA
molecular weight: 67841,03700 Da
isoelectric point:6,42556
aromaticity:0,12520
hydropathy:-0,29691

Domains

Domains [InterPro]
IPR011043
STR
36–296
IPR011043 IPR015915
IPR015915
STR
39–246
IPR015915 IPR015915 IPR015915
PF24681
STR
268–457
PF24681 IPR006652 IPR006652
PTHR24412
Unmapped
285–475
PTHR24412
IPR006652
STR
349–400
IPR006652 IPR006652
XOD41408.1
1 615
Architecture
STR
STR 36-614 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XOD41408.1
1 615
Domain Start End Length (AA) Confidence
N-terminal 1 19 19 0,8366
Central domain 20 224 206 0,4282
C-terminal 225 615 390 0,4025
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-19
Central
20-224
C-terminal
225-615

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage HHBS36_1
[NCBI] 		3390392 Viruses >
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XOD41408.1 [NCBI]
Genbank nucleotide accession
PQ287642 [NCBI]
CDS location
range 11733 -> 13580
strand +
CDS
ATGTTTGAATTATTGTTATCAGCTGCTGGGCAAGCTAAGCCAGTGGAAATGATACCGTATAACCAACCAACATTGTTTGGACAACTGGATGTTGGATTGGTTGGATCGGTACCCTATTTCAGAAATGGTTTATTAAATATTAATAGTGGTGCTCCATCAAGAAGTACAACTGATAATAAAATCAGAATTTTTGATAGCACTGGTACTCAAATCAGTAAAACAGCTGTCCAAAATAGTTATTCACTTTGTCATACTGCGGGTGTATTTGTTCCAACATCTGATAGACTTTACATGTTCGGTGGGCGTCGTGGGGCTTCTTGGACACAAAACGTCATCACGATGATCAATCCAACTGTACCTAATGATAATCTTATTAGTAATCAGTTGATGAATACATCCACTTATAACAGTATCGGCGATTGGGATGGCGGTGAATTTATTTGGGTACTGGAACATGCAACAGATCTTTTGATTCGCTATAGACTATCGAATAACGTTCGAGAAGTAATGAGTGCCCGGTGCCCTGTTATTCTATCTGGAGCGTATGCATTCTGCCATAAAGGGAATTTCTATGTGATGGGTGGATGGAAGAACATCTCTGGCAGTTGGGTTGTTAACCAAGATGTTTATAAATACACCGTTGCTATTAATACATGGACATTGTACCATTCATACTCCACAGACTACCACGGTGGTCATCAAGGTGGTAAGTACTGGAACGGGACTTTTAACTACACTATCGTTAAAGATGGTAAGATTCATTGTGTTCGTTATTATATCGCCGAAAAACAATTTGTTGTTACTGAGACGAATATTGGTGAGGTCCATGGGACATCAGTCGCATTAAATCCATCGAATGGCGATCTGTATCTGATCGGTGGTTCGGACATTGTTATCGATGACGCCCTTTTTAACACCCCTGAAAGAACGAAAGCAGCTATCTATAAATTCACTATTCCTATCCCTCCAAGTAAAACTGAATGGGAAGTAATGGCAAACGCACCTTATGATAGTCGAGGTTCCACTGCGGTTGTAATAGATGATGAACTGTATATGTTCGGCGGGTATACAAGTACAGGTGCATATAGAGGCGCGTTTAATAAATATAATCCTGAGACTAATACATGGAACGGTCTATTCACTGGATCTGGTTTAAGTCCGAGTGCACGTGCTAATATGTGTGCAGCTGCAAATGATACACATATGTACCTATTCAGTGGATCTAACCAATCAGCAGATTTCTGGCGTTATAACGTAGCGACCAATGATTGGACGGCTATTACACCCGCTTCTCCGGGTTCATCTAATCCAGTATTTAGAACACAAGCTACGATGGTTCATTATAATGGTAAGCTCTATTTGCTTGGCGGGAATAATGAATCTGACGCGTTGTTCGTCTACGATATTGCATCTAACATGTGGTCAAAACGAGTTGCGCAAGGTGGTATCCAACGATCTTCGCATAGAGCGGTTGTTGTCGGCGAGTACATGTATGTCTATGGTGGATTTGTAAATGGTTCGCAATCCGGTCGATTTGATCGAATGAATATGAATACATTTGCATGGGAGTCTCTACCGACTACCGATGGGCCAGGTGTTAACAGTTACGGTGTAATGCTGACTAACGATGAAGAAATTATATACATTGGCGGTGTTGACGAAGACAAACGTAGAAAAGCCAATGCGTATAATATCCAATCGAGAACATGGCGTAAACTACCAGAACTACCAAACGGTGTGAATGATGGCTATGGTGGATTTATTAATGGCACAGCATATGTTGGCGGTGGTCTAACTGGAGCCAGTAATAATACAATTACAGACAAGTTCTATCGTCTTGGAATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8aeceac7743ef7fa70274406390737af657fa2c5032b4974d6ba0f5db3f5e685
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8889
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50