Protein

View in Explore
Genbank accession
WZX06660.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,88
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MQLVITNAGIAAARAAESGGYKINITAFKVGSGYNYNPMAGDSALRGTILHTGAPVSITIENADTAVYNLRMDDTIGDFLYGELGLYLEDGTLFGIAAFSTLQEKRKSSSGVAGNIIAFETKIRLASIAAVLEFTTVNNVNLPFISGVHLLSLPSEASSNAYLTANRTHNGGSVVAVQSSNDLWAFGSHPVRYLAAAAQGGSTTTSLTSTGLGTLPEFVAGKYLIQFTSGIRKGQVRQISAVGVNTVTWTDALAGAPATGDTFEILRAIGGSATREVGLAAGNVIEVGAAGLAGAAVIVADLNTTQPSGFYRILPTAANRPADAHFDVLNMRHDTGSAQLAVGIADGALYSRSNNGTWKAIYRFGEVSYSDLTNVPSSFTPSQHTHPANQITSGVFDVARMANGSVAAGRTIRIDGNGAPQWAPLSWDDISGKPGTFTPSSHTHDSSQIVSGLLNFARVAYTGGTPTDGQVGRYSASAGYSQWTHLMWNDISNKPTTFTPSYHDHSYAQVVFWLGYTPVQQGTGVGQSQNPVKIGWSGAGVLKLTVDNTDLGNFAMQNWVSANYSPLGHTHVISQIADLQNQLNYRANRTEDVSFRDVTCNRGDGTGVVWLGNGGNRYLHYDGSRYYMPGTKLTVDGGLETANWVVGYGMRTTSDARKKTDFKNLQNSRNILRQLQGESYRMIDTNEDREGFVAQKVQKLIPRAVFQNSDGFLSLDPFPFVAHLVEGFKDIDEDVESLKTTIQQQGQQIQELQRLIQQLIQKG
Physico‐chemical
properties
protein length:763 AA
molecular weight: 81716,11790 Da
isoelectric point:6,28596
aromaticity:0,08912
hydropathy:-0,19187

Domains

Domains [InterPro]
DC_1549
ATT
1–300
DC_1549 DC_0440
IPR022225
ATT
3–128
IPR022225 DC_0172 IPR030392
cd19958
STR
299–360
cd19958 IPR030392 Coil
WZX06660.1
1 763
Architecture
ATT
STR
RBD
ATT 1-300 | STR 301-486 | RBD 487-763
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage phiXF1
[NCBI] 		3141530 Viruses >
Host Xanthomonas campestris pv. campestris
[NCBI] 		340 Bacteria > Proteobacteria > Gammaproteobacteria > Xanthomonadales > Xanthomonadaceae > Xanthomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WZX06660.1 [NCBI]
Genbank nucleotide accession
PP475461.1 [NCBI]
CDS location
range 85968 -> 88259
strand -
CDS
ATGCAGCTCGTCATTACGAACGCTGGCATCGCGGCGGCTCGGGCAGCGGAGTCTGGTGGCTACAAGATCAACATCACCGCGTTCAAGGTCGGTTCCGGGTACAACTACAACCCGATGGCAGGCGACTCTGCACTTCGTGGTACGATCCTGCATACCGGCGCTCCCGTCTCCATCACCATCGAGAACGCAGACACTGCAGTCTACAACCTGCGCATGGATGACACCATCGGTGACTTCCTGTACGGCGAGCTGGGCCTGTACCTCGAAGACGGTACCCTGTTCGGTATCGCTGCCTTCTCGACTCTGCAGGAGAAGCGCAAGTCGAGCAGTGGCGTCGCAGGTAACATCATCGCCTTCGAAACCAAGATCCGACTGGCGAGCATCGCAGCGGTCCTGGAGTTCACGACCGTCAACAACGTCAACCTGCCGTTCATCAGTGGTGTGCATCTGTTGAGCTTGCCTTCCGAGGCGAGCTCCAATGCGTACCTGACTGCGAACCGTACGCACAACGGTGGCTCTGTCGTCGCAGTCCAGTCGTCCAACGACCTCTGGGCCTTCGGTAGCCATCCCGTGCGTTACCTCGCAGCTGCTGCTCAGGGAGGCTCGACGACCACGTCCCTGACCTCGACCGGTCTCGGTACTCTCCCTGAGTTCGTGGCCGGCAAGTACCTGATCCAGTTCACCTCGGGCATTCGTAAGGGTCAGGTCCGTCAGATCTCGGCAGTCGGTGTCAATACCGTGACCTGGACCGACGCACTGGCAGGCGCTCCGGCTACTGGTGACACCTTCGAGATCCTCCGTGCCATCGGTGGTTCTGCGACTCGTGAGGTTGGACTCGCAGCTGGTAACGTGATCGAAGTAGGTGCAGCCGGCCTCGCGGGTGCAGCTGTCATCGTCGCGGATCTCAACACGACTCAGCCGAGTGGCTTCTACCGTATCCTGCCCACCGCAGCGAATCGTCCTGCGGATGCGCACTTCGACGTCCTGAACATGCGGCACGATACCGGCAGTGCGCAGCTTGCTGTCGGCATCGCGGACGGTGCTCTCTACAGCCGTTCGAACAACGGTACGTGGAAGGCGATCTACCGCTTCGGTGAGGTGTCGTACAGTGACCTGACGAACGTCCCGTCGAGCTTCACTCCGTCGCAGCATACGCATCCTGCCAATCAGATCACGTCCGGTGTCTTCGACGTCGCACGTATGGCGAACGGCAGCGTAGCGGCAGGTCGAACGATCCGCATCGATGGCAATGGTGCACCTCAGTGGGCTCCGCTCAGCTGGGATGACATCAGCGGCAAGCCGGGCACCTTCACTCCGTCGTCACACACGCACGACTCCAGTCAGATCGTCTCTGGTCTGCTGAACTTCGCTCGTGTGGCTTACACGGGTGGCACTCCGACTGATGGTCAGGTCGGTCGTTACAGTGCTTCTGCTGGCTACTCGCAGTGGACGCACTTGATGTGGAATGACATCTCCAACAAGCCGACCACCTTCACTCCATCGTACCATGATCACTCCTACGCGCAGGTCGTGTTCTGGCTCGGGTACACGCCTGTCCAGCAGGGTACCGGTGTAGGGCAGTCGCAGAACCCAGTGAAGATCGGCTGGTCCGGTGCTGGCGTCCTGAAGCTGACTGTCGATAATACCGACCTCGGCAACTTCGCGATGCAGAACTGGGTCAGTGCGAACTACTCGCCGCTCGGTCACACTCACGTGATCTCGCAGATCGCCGACCTGCAGAATCAGCTGAACTACCGTGCCAACCGTACGGAGGACGTCAGCTTCCGTGACGTGACGTGCAACCGAGGTGATGGTACGGGTGTCGTGTGGTTGGGTAACGGTGGTAATCGTTACCTGCACTACGATGGGTCCCGTTACTACATGCCGGGTACGAAGCTGACGGTCGATGGTGGTCTGGAGACTGCCAACTGGGTGGTCGGCTACGGCATGCGCACCACGTCCGATGCTCGCAAGAAGACGGACTTCAAGAACCTGCAGAACAGTCGAAACATCCTGCGACAGCTGCAGGGTGAGTCCTACCGGATGATCGACACGAACGAGGACCGTGAAGGCTTCGTCGCTCAGAAAGTCCAGAAGTTGATCCCGCGAGCTGTCTTCCAGAACTCCGATGGGTTCCTGTCGCTGGATCCGTTCCCGTTCGTGGCTCATCTGGTCGAGGGCTTCAAGGACATCGACGAGGACGTGGAAAGCCTCAAAACCACCATCCAGCAGCAAGGTCAGCAGATCCAGGAGCTGCAGCGTCTGATCCAGCAGCTGATCCAGAAGGGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ef24fcbe6401c4764e19117c8d334baa742457b8963ec17fccb1d615469fa937
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6759
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50