Protein

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Genbank accession
XAG95371.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MSCNHNRYTRPGCIPPQPFNAIAQAVRDALADRMVELQGYSTSAAASALSASGSAAEAKQYSMDALNYRDQSQQIFNSAQELVPQINETAASLQETAEIVRDISENASSFQIVKYPYTVLGGESTIEIPSKYEVLAIQSIIVEGITLQAATGDYVYDAATRTITLAQAFPEEAAGLVIVINLGQRNVESPETALSILASGTGAGQVGTASGTTIQTELNQLKAKDSIHDDQITGLQNDKVAKVNLASAQGASLVGLPQGGNLSQVLTYVTPEQFGAIGDGKIHPLSELYSSLADAKSVYSFVTDLSQTIDWAACQAAENYACGVTVVRVKPYASYHFGRDGLLIDQYSQWEGVRPSSQERKTTQFKKTFPTSTPVFQQDYIVRVRPGNNDSGYDYKAGIRFVGIQLKYDVPRRHPTKGTNTICFHTGNMIKGELDISCWGAEYGVYTWTHWGNKGHLRIDNCHKGYWSVPNLKDNERTGGETTSNFYRIETDVTPFPITLGNANYSEFTGFFEGSVVGDGNYDSANETACGITIIGEVQNVSFFMGIERWEGVHVTKAGSGSVANATFKLHFFANSHYLQSTGNDGSDAALRQLNDTSVSKISLPAATRAYFNGIVSNGRCIFNIQDAYYYLGHIDKEVTSTRYLINMQDATSRINFIGGQVGFVPEQGMAPVAFSPTESMKAIVTSIGCRAMELFCSPSTAFRLVNLNQWESVNPVAVLGTIDGTSGQYADFVPPNTTYRVSDLGGLWSNYGSTGAAIAARPSIIAYDGTTKSLRVASSYYATRLTFTATVRLSI
Physico‐chemical
properties
protein length:796 AA
molecular weight: 86219,21220 Da
isoelectric point:5,43707
aromaticity:0,09799
hydropathy:-0,20038

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XAG95371.1
1 796
Domain Start End Length (AA) Confidence
N-terminal 1 309 309 0,9929
Central domain 310 710 402 0,9880
C-terminal 711 796 85 0,9686
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-309
Central
310-710
C-terminal
711-796

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage MIF8
[NCBI] 		3141526 No lineage information
Host Erwinia sp.
[NCBI] 		558 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XAG95371.1 [NCBI]
Genbank nucleotide accession
PP700702.1 [NCBI]
CDS location
range 61207 -> 63597
strand +
CDS
ATGAGCTGCAATCATAATCGTTATACACGTCCAGGCTGCATTCCACCTCAGCCTTTTAATGCCATTGCACAAGCTGTACGTGATGCTCTAGCTGATCGTATGGTAGAACTACAGGGCTACAGTACTTCAGCAGCAGCCTCTGCACTGTCTGCATCTGGTTCAGCAGCTGAAGCTAAACAGTACTCAATGGATGCATTGAACTACCGTGACCAGTCACAGCAGATCTTTAACTCTGCACAGGAACTGGTTCCTCAGATCAATGAAACTGCTGCTTCTCTTCAGGAGACAGCAGAGATTGTTCGTGATATCTCAGAGAATGCTTCCAGTTTCCAGATCGTTAAATACCCATACACTGTACTTGGTGGTGAATCTACTATTGAGATCCCCTCTAAATATGAAGTACTGGCAATTCAGTCCATCATTGTAGAGGGTATTACTCTTCAGGCTGCTACAGGTGACTACGTGTATGACGCAGCAACACGTACTATCACACTGGCTCAGGCATTCCCTGAAGAAGCTGCTGGCTTGGTTATTGTTATCAATTTAGGTCAGCGTAACGTTGAATCACCTGAAACAGCATTGTCTATTCTGGCTTCTGGTACTGGTGCAGGTCAGGTTGGAACAGCGTCTGGTACTACAATCCAAACTGAGTTAAACCAGTTAAAAGCTAAAGACTCTATCCATGATGATCAGATTACTGGCTTACAGAATGATAAAGTAGCCAAAGTTAATTTAGCTTCTGCACAAGGAGCAAGCTTAGTAGGCTTACCTCAAGGAGGTAATCTTTCACAAGTTTTAACTTATGTTACTCCCGAACAATTCGGAGCAATTGGGGATGGTAAAATTCATCCACTCTCAGAACTCTATTCATCCCTGGCAGATGCAAAATCAGTATACTCATTTGTTACGGATCTCTCGCAGACAATAGACTGGGCTGCTTGTCAGGCGGCAGAAAACTATGCATGTGGTGTGACCGTAGTTCGGGTAAAACCCTATGCCTCCTACCATTTCGGGCGTGATGGTTTGCTGATAGACCAGTACAGCCAGTGGGAAGGTGTAAGGCCGTCTTCGCAGGAAAGGAAAACCACACAGTTTAAAAAGACATTCCCTACATCTACGCCGGTTTTCCAGCAGGACTACATCGTTCGTGTACGTCCGGGAAATAATGATTCTGGTTACGATTATAAAGCCGGAATACGTTTTGTTGGGATCCAGCTAAAGTATGATGTTCCTCGTCGCCACCCTACAAAGGGTACGAATACTATCTGCTTCCACACCGGCAACATGATTAAAGGTGAGCTGGATATCTCTTGCTGGGGAGCTGAATACGGGGTTTATACCTGGACTCACTGGGGTAATAAGGGTCATCTGCGAATCGACAATTGCCATAAAGGGTACTGGTCTGTTCCTAACCTGAAAGATAACGAACGTACTGGCGGTGAAACTACTTCCAACTTTTATCGTATTGAAACTGACGTTACGCCGTTCCCTATTACACTGGGTAACGCAAATTACTCAGAGTTCACTGGTTTCTTTGAAGGTTCAGTTGTCGGTGATGGTAATTATGACAGTGCCAATGAAACAGCCTGTGGCATTACTATCATCGGGGAAGTACAAAACGTTAGTTTTTTCATGGGCATCGAAAGGTGGGAAGGTGTCCACGTAACTAAAGCGGGGTCTGGCAGCGTAGCCAATGCCACCTTCAAACTTCACTTTTTTGCTAACTCCCATTATCTCCAATCGACGGGCAATGATGGATCTGATGCTGCTTTGCGTCAATTAAATGACACGTCTGTAAGTAAGATTTCACTGCCAGCAGCAACAAGGGCATATTTCAATGGGATAGTCAGTAATGGTCGCTGCATATTTAATATACAGGATGCTTACTATTACCTGGGACATATCGATAAGGAAGTTACTAGTACTCGTTATCTTATTAACATGCAGGACGCAACTAGCAGGATTAACTTTATCGGTGGTCAGGTAGGATTTGTGCCTGAGCAAGGTATGGCTCCTGTCGCATTCAGCCCTACAGAAAGTATGAAAGCAATCGTAACCTCCATCGGTTGTCGGGCGATGGAGTTATTTTGCAGCCCCAGCACTGCATTCCGACTGGTAAATCTTAATCAATGGGAAAGTGTAAACCCGGTGGCAGTTTTAGGTACTATAGATGGTACAAGTGGTCAGTATGCGGATTTCGTACCCCCTAATACTACTTACAGAGTTAGTGATTTAGGTGGGCTATGGTCAAATTATGGTAGTACGGGAGCAGCCATCGCCGCCAGACCATCTATTATCGCCTACGATGGTACAACTAAAAGTTTACGTGTTGCATCTAGCTATTACGCAACTAGGTTAACTTTTACAGCTACTGTGCGGTTAAGTATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a7c36d2fc0c4f1216aaee73e9a507a849492be64ed9381a0050bdd3ff0a342fb
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6143
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Could bacteriophages be used as a novel pest management tool to control gut endosymbionts in Western Flower Thrips? Krueger,S., Kroj,A., Lehnherr,T., Lehnherr,H. and Stuiver,M. 2024 — GenBank