Protein

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Genbank accession
YP_009600164.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,93
Protein sequence
MAKKIFQNYDFAGNQIIDFRAENLGANPSSGKAGRVFFNTSTSVLAIDTGSTIKPLLTEVAWDDILSKPSTFAPSAHTHPQSGITDLVTDLAAKAPLASPAFTGNPTAPTQTAGNNSTRIATTAFVQNALSGAGEGDMLKATYDTNDDGKVDAADTADAAPWSGITGKPTTLAGFGITDAFSDAEAGALATLDTVGTAQIDDEAVTLAKLAHVATNRILGRTSASTGDVEVLTAAQVKAILSIAIADVTGLQTALDNKAASSHTHTASEITDFDAEVEAKIISYWDSIAGTDANVDTIREVLDLILQNASDITAQIARYNADIGDGSSTSIAVTHNLNSLDVSVEVYDKASGDTVGVGVTRTNANVVTIEAIPAPASNELRVVIKK
Physico‐chemical
properties
protein length:386 AA
molecular weight: 39795,55280 Da
isoelectric point:4,45495
aromaticity:0,04922
hydropathy:-0,01373

Domains

Domains [InterPro]
DC_1589
STR
3–385
DC_1589
PF12789
STR
245–280
PF12789
YP_009600164.1
1 386
Architecture
STR
STR 3-385 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Dinoroseobacter phage vB_DshS-R5C
[NCBI] 		1965368 Uroviricota > Caudoviricetes > Nanhaivirus >
Host Dinoroseobacter shibae
[NCBI] 		215813 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Rhodobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009600164.1 [NCBI]
Genbank nucleotide accession
NC_041921.1 [NCBI]
CDS location
range 14834 -> 15994
strand +
CDS
ATGGCCAAGAAGATCTTTCAGAACTACGACTTCGCGGGTAACCAGATCATTGACTTCCGCGCGGAGAACCTGGGTGCGAACCCGTCGAGCGGAAAAGCGGGGCGCGTGTTCTTCAACACGAGCACCTCCGTCCTTGCAATCGACACCGGCTCGACCATCAAGCCGCTGCTGACCGAGGTCGCGTGGGACGACATCCTGAGCAAGCCGTCCACGTTCGCGCCGAGCGCGCACACCCACCCGCAGAGCGGGATCACCGACCTGGTCACCGACCTCGCCGCGAAAGCACCTCTTGCGTCTCCTGCGTTCACGGGCAACCCGACTGCGCCCACGCAGACGGCCGGGAACAACTCGACGCGCATCGCCACCACGGCCTTCGTCCAGAACGCGCTTTCGGGCGCAGGCGAAGGCGACATGCTCAAGGCGACCTACGACACCAACGACGATGGCAAAGTCGACGCAGCAGACACCGCAGACGCTGCGCCTTGGAGCGGCATCACGGGCAAGCCGACCACGCTGGCAGGTTTTGGCATCACAGACGCGTTCTCTGACGCAGAGGCCGGGGCTCTCGCGACGCTCGACACCGTGGGCACGGCGCAGATCGACGACGAGGCCGTGACCCTCGCGAAACTCGCGCACGTCGCGACCAATCGCATCCTGGGCCGCACGAGTGCGTCCACGGGCGACGTTGAAGTCCTGACCGCCGCGCAAGTCAAAGCGATCCTGAGCATTGCCATCGCGGACGTGACCGGTCTGCAGACGGCGCTCGACAACAAGGCCGCATCCTCGCACACTCATACGGCGTCTGAGATCACCGACTTCGACGCGGAGGTGGAAGCGAAGATCATCTCGTACTGGGATTCCATTGCAGGCACCGACGCGAACGTGGACACGATCCGCGAGGTCCTTGACCTGATCCTTCAGAACGCCTCGGACATCACTGCGCAGATCGCTCGCTATAACGCGGACATCGGTGACGGGTCCTCGACGAGTATCGCCGTGACTCACAACCTCAATTCGCTCGATGTGTCAGTCGAAGTTTATGATAAAGCTTCCGGCGACACCGTGGGCGTTGGCGTGACTCGCACCAACGCGAACGTGGTGACCATCGAAGCAATTCCGGCGCCTGCATCAAACGAGCTCCGCGTCGTGATCAAGAAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9d4354c9a005082a3528f5681ce8ff70c4935cad4b6892bfed15e10bb7ba6707
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7851
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A novel roseosiphophage isolated from the oligotrophic South China Sea Yang,Y., Cai,L. and Zhang,R. — — GenBank