Protein

View in Explore

Genbank accession

XCO42067.1 [GenBank]

Protein name

tail fiber protein

RBP type

Evidence GenBank

Probability 1,00

Evidence RBPdetect

Probability 0,86

Evidence RBPdetect2

Probability 0,95

Protein sequence

MAIKTKIIVQQLLNIDDTITTASKYPKYTVVLANSISSITAGELTSAVEASAASAAAAKQSEINAKASENGAAISAAASQQSATQAASSATASANSAKAAKTSETNAKASEVAAKTSETNAKASEVAAKTSETNAKASETAAKTSETNSKTSETNAKASETAAKTSETNAKASETAAKTSETKSKTSETNSKASEVAAKTSETNSKASEVAAKTSETNSKASEVAANTSETNAKASEVAAKTSETNAKASETAAKTSETNAKASENAAAASKNAAKTSQDAAKASETAALASKNAAAASETAAKASENAAAASKNAAATSATSADSSKVAAAASAAAAKTSETNAKTSETNAKTSETNANNSKNAAATSETNAKTSETNAKTSETNAKTSETNAKEYADKASLIASPLTQYDWPVGTATGAKYVRIAKLTDPNSSECHITLMITNGGNYGARQGSIDFLDASARGLGTTVINTSNVLQFMQIRRLGDPSLAEDNQLRYGIVKGDGFFEIWAYQRAFINNVKVAILAKAGWVDLYIPSGYVSQNDMPAGWVESKAIRVYDELNKPSKEALGLGSAAYKDVGTSNDNVMQVGAFGLGGSGISYDNITSDADLLQRMREKGGHFWRASQKSGSSSSVMSHGSGMSSRCGDTISAINIDYNSGKVVILAANDASLNAGNVKVNTLFGTVNKPSKSDVGLNNVTNDAQVKKVGDTMTGDLDIAKATPAIRLKSSSGNAHVWFQNGDGGERGVLWSPPNNESLGEVRIRAKTTGGTTGGDFIVRHDGRIEARDAKISYKISSRTADFSNDDTDTGATSLRVSGKQHTPIMLTRDADSDLSIGFKLNNMSAKLLGIDVDGDLAYGENSNQAQNSKVVTRKMMDAGFSVAGPMTFANGFFGAWEAENIDGQTLDLNSLTINLSTPGTVRIYRCPGYGGGANITNKPSGVGGNFILYVESLRKVSNTDFANRQRIFSSDLNREFTRYYNGGTWSAWRESVVSGMNQDVSVKTLSASGSLSGSELAISGASSLNGNLGVGGGAASKVPGSDKGIVIGRGSIVREGGEGRLILSAFDGTDRRIQFRPAGSAASNNQVEIYCTAATAGDTHFTFGQGARLRANEAGALIVSSKAGQMMYFRPNGDGSPNGQMTIDGSGNMVVNGGVNSKGIDVTASQSLPLKETTATTGVGVNFIGDNATECSFGIENTAGGSAVFHNYARGASNSVTKNNQLLGGYGSRPWLGSDYTEHSNAALHFLGAGDTSGTNHGGWIRLLVTPKGKTISDRVPAFRLSDNGDLWLVPDGAMHSDLGLVRSFETLNAVVPKFNAPTNQDGRGLKLVSSDGAPEINMIAPRGSATSSPAVRAMWCDGSLGNSDKYIGATQSWSSFFFGASGHDGEKFDSMRGAVNIQAAGGWGTSSTPTRILFETCTVGSTARTARWSVDHNGNFVPMGDGSYDIGWGSGRVKNIYATNGSINTSDARLKNDVRMMSNPETEAAKAIAKEIGFWTWKEQADMNDIREHCGLTVQRAMEIMESFGLEPFKYGFICHDEWDEQTVVSEYGSLNEDGTENPVYKTIPAGDRYSFRLDELNMFIAKGFEARLSEIEEKLGM

Physico‐chemical properties

protein length:	1598 AA
molecular weight:	166929,06450 Da
isoelectric point:	6,12556
aromaticity:	0,06195
hydropathy:	-0,41483

Domains

Domains [InterPro]

DC_0608
ATT
1–159

DC_0608 DC_1159 cd19958 DC_0783

PTHR12460
Unmapped
49–380

PTHR12460 DC_1159 IPR036388

IPR004089
STR
129–379

IPR004089 cd10144

DC_0608
ATT
154–257

DC_0608 IPR030392

IPR030392
CHP
1466–1596

IPR030392

XCO42067.1

1 1598

Architecture

ATT

STR

RBD

ATT 1-257 | STR 258-1112 | STR 1145-1554 | RBD 1555-1598

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
DC_0608	ATT	DC_0608	1	159	Novel HMM	DC_0608	N-terminal	Low	Positional only	308 proteins / 308 hits
PTHR12460	Unmapped	-	49	380	PANTHER	CYCLIN-DEPENDENT KINASE INHIBITOR-RELATED PROTEIN	-	-	-	-
IPR004089	STR	DC_0068	129	379	InterPro cluster	Methyl-accepting chemotaxis protein (MCP) signalling domain	Central	Low	Positional only	22 proteins / 25 hits
DC_0608	ATT	DC_0608	154	257	Novel HMM	DC_0608	N-terminal	Low	Positional only	308 proteins / 308 hits
DC_1159	STR	DC_1159	287	583	Novel HMM	DC_1159	Central	Low	Positional only	94 proteins / 94 hits
DC_1159	STR	DC_1159	574	1112	Novel HMM	DC_1159	Central	Low	Positional only	94 proteins / 94 hits
cd19958	STR	DC_0464	904	989	InterPro cluster	cd19958	Central	Low	Positional only	1183 proteins / 1674 hits
DC_0783	STR	DC_0783	1145	1554	Novel HMM	DC_0783	Central	Low	Positional only	82 proteins / 82 hits
IPR036388	RBD	IPR036388	1452	1598	Merged direct domain	Winged helix-like DNA-binding domain superfamily	C-terminal	Low	Positional only	96 proteins / 96 hits
cd10144	CHP	DC_0088	1466	1588	InterPro cluster	cd10144	C-terminal	High	Text match	3502 proteins / 3959 hits
IPR030392	CHP	DC_0088	1466	1525	InterPro cluster	Intramolecular chaperone auto-processing domain	C-terminal	High	Text match	3502 proteins / 3959 hits
IPR030392	CHP	DC_0088	1466	1596	InterPro cluster	Intramolecular chaperone auto-processing domain	C-terminal	High	Text match	3502 proteins / 3959 hits

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Klebsiella phage phi1_146058 [NCBI]	3232236	Viruses >
Host	Klebsiella pneumoniae [NCBI]	573	cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Genbank protein accession

XCO42067.1 [NCBI]

Genbank nucleotide accession

PP889506.1 [NCBI]

CDS location

range 21395 -> 26191
strand +

CDS

ATGGCAATCAAAACTAAAATTATTGTACAGCAGCTTCTAAACATAGATGATACCATAACTACTGCTAGTAAGTACCCTAAGTATACGGTAGTTCTGGCTAATTCTATTAGTTCTATTACAGCGGGAGAGTTAACTTCGGCTGTGGAAGCATCCGCAGCTTCTGCTGCCGCAGCTAAGCAGTCAGAGATTAATGCCAAAGCTTCCGAGAATGGGGCCGCTATCTCTGCGGCAGCTTCTCAACAATCTGCAACTCAAGCTGCCTCTTCTGCTACTGCTTCTGCTAATAGTGCTAAAGCTGCTAAAACTTCGGAGACTAATGCAAAAGCATCAGAAGTAGCTGCTAAGACTTCGGAGACTAATGCAAAAGCATCAGAAGTAGCTGCTAAGACTTCGGAGACTAATGCAAAAGCTAGTGAGACAGCTGCTAAGACTTCGGAGACTAATTCTAAGACTTCGGAGACTAATGCAAAAGCTAGTGAGACAGCTGCTAAGACTTCGGAGACTAATGCAAAAGCTAGTGAGACAGCTGCTAAGACTTCGGAAACTAAATCTAAGACTTCAGAGACAAACTCTAAGGCTTCAGAAGTAGCTGCTAAGACTTCGGAGACAAACTCTAAGGCTTCAGAAGTAGCTGCTAAGACTTCAGAGACAAACTCTAAGGCTTCAGAAGTAGCTGCTAATACTTCAGAGACTAATGCAAAAGCATCAGAAGTAGCTGCTAAGACTTCGGAGACTAACGCAAAAGCTAGTGAGACGGCGGCTAAGACCTCAGAGACTAACGCAAAAGCTAGTGAGAATGCAGCAGCAGCAAGCAAAAACGCAGCAAAAACCAGTCAAGATGCAGCGAAAGCAAGCGAAACGGCAGCGCTAGCAAGTAAGAACGCGGCAGCGGCAAGTGAGACAGCAGCCAAGGCGTCAGAAAACGCAGCAGCAGCCAGCAAGAACGCGGCGGCAACAAGTGCTACTAGCGCAGACAGTAGTAAGGTAGCGGCAGCAGCGAGTGCGGCAGCAGCAAAGACTAGCGAGACGAATGCAAAGACTAGCGAGACGAATGCAAAGACTAGCGAGACGAACGCTAATAACAGCAAAAACGCTGCTGCAACATCCGAAACGAATGCAAAGACTAGCGAAACGAATGCAAAGACTAGCGAGACGAATGCAAAGACTAGCGAGACGAATGCTAAGGAGTATGCCGATAAAGCCTCTCTTATTGCCAGCCCGCTGACTCAATACGATTGGCCCGTTGGTACAGCGACAGGTGCTAAGTATGTGAGAATTGCAAAGCTCACTGATCCGAATTCGTCTGAATGCCACATTACACTAATGATCACAAACGGCGGAAACTATGGAGCGCGTCAAGGCTCAATAGACTTTCTTGATGCGTCGGCGCGCGGGCTTGGAACAACCGTTATTAACACTTCAAACGTTCTCCAGTTTATGCAGATTCGCCGCCTTGGTGATCCGAGCCTTGCGGAAGATAACCAATTGCGGTACGGGATTGTTAAGGGTGATGGATTCTTTGAGATTTGGGCTTACCAGCGGGCTTTCATTAATAACGTGAAGGTGGCTATTCTGGCAAAAGCAGGTTGGGTTGACCTCTATATTCCTAGCGGATATGTTAGCCAAAACGACATGCCAGCCGGCTGGGTGGAAAGCAAGGCTATACGCGTGTATGATGAGCTTAACAAACCGTCAAAAGAGGCTTTGGGGCTAGGTTCGGCAGCTTATAAAGATGTTGGTACGTCAAATGATAACGTGATGCAGGTAGGTGCTTTTGGTCTTGGGGGTAGTGGTATTTCATATGATAACATTACCAGCGATGCAGACTTATTGCAACGCATGAGAGAGAAAGGGGGGCATTTTTGGCGAGCAAGCCAGAAGTCTGGATCTAGCTCAAGCGTCATGTCCCACGGCTCTGGTATGTCTTCCCGCTGTGGAGACACTATTTCAGCGATTAACATTGACTATAACAGCGGTAAGGTTGTGATACTCGCCGCCAATGATGCAAGCCTCAACGCCGGAAACGTAAAGGTAAATACCCTTTTTGGCACAGTCAACAAGCCATCAAAATCAGATGTTGGCCTAAACAATGTAACCAACGACGCTCAAGTTAAGAAGGTTGGCGATACCATGACGGGCGACCTTGATATTGCCAAAGCGACTCCAGCTATCCGGCTCAAGTCGTCAAGTGGTAATGCTCATGTATGGTTTCAAAATGGTGACGGCGGAGAACGAGGAGTGCTTTGGTCGCCGCCAAACAATGAATCGCTGGGTGAGGTACGCATTCGCGCAAAGACCACTGGCGGCACAACTGGTGGAGATTTTATTGTGCGCCATGATGGACGAATCGAAGCGCGAGACGCAAAGATCAGTTACAAGATCTCTTCTCGTACCGCTGATTTCTCTAATGACGACACAGACACTGGGGCAACAAGTCTAAGAGTTAGTGGCAAGCAACACACGCCAATCATGTTAACACGCGACGCTGATTCTGATCTGTCAATTGGGTTTAAACTTAACAACATGAGCGCAAAGCTTTTGGGCATTGATGTTGATGGCGATCTCGCTTATGGAGAAAATTCAAACCAAGCGCAAAACAGCAAGGTTGTAACGCGTAAAATGATGGATGCTGGTTTCTCTGTTGCTGGACCAATGACGTTCGCTAATGGCTTTTTTGGGGCTTGGGAGGCTGAGAACATAGATGGGCAGACACTTGATCTTAACAGCCTAACGATTAACCTGAGTACTCCTGGGACGGTACGCATTTATCGGTGCCCAGGATACGGAGGTGGTGCAAATATTACTAACAAGCCAAGCGGTGTAGGCGGAAACTTCATTCTTTACGTCGAGTCACTTCGTAAAGTGAGTAACACTGATTTCGCTAACCGTCAGCGTATTTTTAGCTCTGATTTGAATCGTGAATTCACACGTTATTACAACGGTGGAACTTGGTCGGCATGGCGCGAGTCGGTTGTAAGTGGCATGAATCAAGACGTTAGTGTTAAGACGTTAAGTGCATCTGGTAGCCTTTCTGGTAGTGAGCTTGCTATCAGTGGTGCTAGCTCGTTAAATGGAAACCTTGGCGTTGGTGGCGGCGCGGCATCAAAAGTACCAGGGTCTGACAAGGGGATCGTAATTGGTCGCGGCTCAATTGTTCGCGAAGGTGGCGAGGGTCGCTTGATTCTGTCGGCCTTCGACGGCACTGACAGACGAATCCAATTCCGACCTGCTGGCTCTGCTGCATCAAATAACCAAGTCGAAATTTATTGCACGGCTGCAACTGCTGGCGATACTCACTTTACTTTCGGTCAGGGAGCAAGGTTGAGAGCGAATGAGGCTGGGGCGCTAATAGTTAGCTCCAAGGCTGGCCAAATGATGTACTTTCGGCCAAATGGTGATGGTTCTCCGAATGGTCAGATGACGATTGACGGAAGTGGTAACATGGTTGTTAATGGTGGTGTCAATAGCAAAGGGATTGACGTTACCGCATCTCAGAGTTTGCCATTGAAGGAGACGACCGCAACAACCGGGGTTGGCGTTAACTTTATCGGCGACAACGCAACGGAATGCTCTTTCGGTATTGAGAATACTGCTGGCGGATCTGCTGTATTCCATAACTATGCACGAGGTGCGTCCAATAGCGTAACTAAGAACAATCAGCTTTTAGGTGGTTATGGTTCTCGCCCGTGGTTAGGATCTGACTACACGGAGCATAGTAACGCGGCGTTGCATTTCTTGGGCGCTGGCGATACATCTGGAACCAATCACGGAGGCTGGATTCGCTTACTTGTCACCCCTAAAGGTAAGACGATTAGCGATAGGGTTCCGGCGTTCAGGCTGTCGGATAATGGCGATCTTTGGCTGGTTCCAGACGGCGCTATGCACTCAGATCTTGGGCTGGTGCGTAGCTTTGAAACGTTAAACGCAGTAGTGCCGAAATTCAATGCTCCAACCAATCAGGATGGTAGAGGGTTGAAACTTGTATCATCGGATGGCGCGCCGGAAATTAACATGATTGCACCTCGCGGTTCTGCTACATCATCTCCTGCGGTTCGTGCAATGTGGTGCGATGGTAGCCTTGGTAACTCTGATAAATATATCGGTGCGACACAGTCATGGTCTAGTTTCTTCTTTGGGGCGTCTGGCCACGACGGGGAGAAATTCGACTCAATGCGTGGCGCAGTTAATATTCAGGCTGCTGGAGGGTGGGGTACAAGCAGTACGCCAACGCGAATCTTGTTCGAAACATGCACTGTAGGATCTACTGCACGAACCGCTCGCTGGAGCGTTGACCACAACGGGAACTTCGTCCCGATGGGTGATGGCAGTTATGATATTGGATGGGGTAGTGGTCGAGTCAAGAACATCTACGCTACAAATGGGTCAATCAACACCTCAGACGCTCGGCTGAAAAATGATGTTCGCATGATGAGCAACCCTGAAACCGAAGCGGCCAAAGCCATTGCGAAGGAGATCGGGTTCTGGACGTGGAAGGAGCAAGCCGATATGAACGACATTCGCGAGCATTGTGGTTTGACCGTACAGCGTGCGATGGAGATCATGGAAAGTTTTGGGCTTGAACCGTTTAAATATGGCTTCATCTGCCACGACGAATGGGATGAGCAAACGGTGGTTTCTGAATACGGTTCGCTTAATGAAGACGGAACAGAAAACCCAGTCTACAAAACCATCCCGGCTGGCGATCGTTATTCGTTCCGACTCGATGAACTTAACATGTTTATCGCGAAGGGATTCGAAGCGCGTCTTTCGGAAATTGAAGAGAAGTTAGGTATGTAA

Genome Context

Tertiary structure

PDB ID

618f9c551e1c3127a38cc05367dcb95e4fd0d4d5b6d916db26a9888c7535376f

ColabFold

Source ColabFold

Method ColabFold

Resolution 0,6801

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Literature

Title	Authors	Date	PMID	Source
The complete genome of Klebsiella pneumoniae phages	Fang,Q., Luo,H., Feng,Y. and Zong,Z.	2016-02	—	GenBank

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence

Literature