Protein

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Genbank accession
UIS24597.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MAWYNDGTISVTNGSKVVTGTGTKFLSNIRNGAILMIGPLRIINDIKSDTELELEVAYDGPTQANIVYEIIRNWQDTSPTELARRIDNFLTDRQRTMDEFVTWVNGTYNGGAANDGKYPLTDRYGKVRLVKSPERMEYETGGTSGGGGGADLTGASIFLASDYGVMGGLTIDETDNINAALNDVALKGGGKLIVRSKNGTDPIYLNGLVAIESNNVTLEFVSDVVYGSKGWMRISGGLAEIRRPGQIELLKLRVNSYANEDGYMVLPMRENNGSFLRVGDRITVRGQNDRNGKVIEKQVTIVNQIIGDDVICSDEPDYTFKPTYPDSDYPEDLTTGTTISISVYSAMTANTRNTDVIPVVDSTGFFAGDLVYVSDARTEKDMMAPVVTNLLSAANMEIVRIAAVEGNNLRLERAIRREYQTVWAAGVVKMDAIKNSHIKLRNVSWIGIQPDRKAHGAAINYGWGCTVRVDDMQGRGGRKGIGVRVAYAYDCHVLDSKVYDAYSFLSAEGYGISLYYSTMCSIRNCNASGNRHNYLLQTATSCDVFDNNSNDDYISGIDLHGAGSVDCRVMRNRLSRSKSYADGVTNGGAIRNGNTAHTIGDHRTVIADNYIEGYLDVKCAAIDVSPSSNDVIIRNNDIVDCAVGFRHYRVGSGISPAQHSNRVTVEYNNFTRVLNPFDVDNYANSAFDELIMIGNKSIENSTHFVVKGIPKVLAMENKILRPVPTPGAFAFDFTRCGNVKAYGNYAGEAARGITVTSCTYAKLVRNMLGDVTENVAVNDGGGNVTLINLQNTDALPSGGGGGTASPAKFTRIMGTLADKITSTDPVNIDNNAPSIANGLTAVQGSVNVAIGSLIEVYAIAPYVSLGGSTGPVTAHLWADGVRVATSVDRLTASTGAENTGGKDFVLVANFIATEEVLDLILKIGPNSNSNTIMLNSKFGGASQPYILVKEFPQ
Physico‐chemical
properties
protein length:953 AA
molecular weight: 102742,18600 Da
isoelectric point:5,36221
aromaticity:0,07555
hydropathy:-0,18447

Domains

Domains [InterPro]
DC_1966
ATT
1–464
DC_1966 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 DC_1256
IPR011050
STR
176–648
IPR011050 IPR006626
UIS24597.1
1 953
Architecture
ATT
STR
RBD
ATT 1-464 | STR 465-648 | RBD 692-953
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UIS24597.1
1 953
Domain Start End Length (AA) Confidence
N-terminal 1 172 172 0,9911
Central domain 173 799 628 0,9946
C-terminal 800 953 153 0,9930
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-172
Central
173-799
C-terminal
800-953

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage ZY21
[NCBI] 		2909584 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas syringae pv. actinidiae
[NCBI] 		103796 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UIS24597.1 [NCBI]
Genbank nucleotide accession
OM140839.1 [NCBI]
CDS location
range 31227 -> 34088
strand +
CDS
ATGGCCTGGTATAACGACGGCACAATCTCTGTGACCAACGGCAGCAAAGTCGTTACAGGGACTGGCACCAAGTTCTTGAGCAACATCCGCAATGGGGCGATCCTGATGATCGGCCCATTGCGGATCATCAACGACATCAAATCGGACACCGAGCTTGAGCTTGAGGTCGCCTATGACGGGCCAACCCAAGCCAACATCGTCTACGAAATCATCCGCAACTGGCAGGACACCAGCCCGACTGAGCTTGCTCGCCGGATCGACAACTTCCTGACCGACCGCCAGCGCACGATGGACGAGTTCGTCACCTGGGTGAACGGCACGTACAACGGTGGTGCAGCGAATGACGGCAAATACCCGCTGACTGATCGCTACGGCAAAGTTCGTCTGGTGAAAAGCCCTGAGCGCATGGAGTACGAGACGGGCGGTACAAGTGGCGGAGGTGGTGGCGCAGACCTCACCGGCGCGAGCATCTTCCTGGCCAGCGACTACGGTGTCATGGGTGGCCTGACCATCGACGAGACGGACAACATCAACGCCGCGCTCAACGATGTCGCCCTGAAAGGTGGTGGCAAGCTGATCGTGCGCAGCAAGAACGGCACCGACCCGATCTACCTCAATGGCCTGGTTGCCATCGAGTCGAACAACGTCACCCTCGAATTCGTGAGCGACGTGGTTTACGGCAGCAAGGGCTGGATGCGTATCTCTGGTGGCCTGGCAGAGATTCGTCGTCCTGGCCAGATCGAGCTGCTGAAGCTCCGGGTCAACAGCTACGCCAACGAAGACGGGTACATGGTTCTCCCGATGCGCGAGAACAATGGCTCGTTCCTGCGTGTGGGCGACCGTATCACCGTGCGTGGTCAGAACGACCGCAACGGCAAGGTGATCGAGAAGCAAGTGACCATCGTGAACCAGATTATCGGCGACGATGTGATCTGCTCCGATGAACCTGACTACACCTTCAAACCGACCTACCCTGATTCGGACTACCCGGAAGACTTGACCACCGGGACCACAATCTCGATCAGCGTGTACTCGGCGATGACTGCCAACACCCGAAACACCGACGTGATTCCGGTGGTCGATTCGACAGGCTTCTTCGCGGGCGACCTGGTTTATGTGAGCGATGCCCGGACAGAGAAGGACATGATGGCCCCGGTCGTCACGAACCTGCTGTCTGCCGCCAACATGGAAATCGTCCGCATCGCTGCCGTCGAGGGGAACAACCTGCGCCTGGAGCGAGCGATTCGCCGTGAGTACCAGACTGTGTGGGCCGCCGGTGTCGTGAAGATGGATGCCATCAAGAACAGCCACATCAAGCTGCGCAACGTTTCCTGGATCGGTATTCAGCCAGACCGCAAAGCACACGGCGCTGCGATCAACTACGGCTGGGGTTGCACCGTTCGAGTGGACGACATGCAAGGTCGCGGTGGTCGGAAAGGTATCGGTGTGCGTGTTGCCTACGCCTACGACTGCCACGTTCTCGACTCGAAGGTCTACGACGCCTACAGCTTCCTGTCGGCCGAGGGCTACGGGATCAGCCTCTACTACTCGACCATGTGTTCGATCCGTAACTGTAACGCCTCTGGCAACCGTCACAACTACCTGTTGCAGACCGCGACCAGTTGCGACGTGTTCGACAACAACTCCAACGACGACTACATCAGCGGGATCGACTTGCACGGTGCCGGCTCTGTTGACTGCCGAGTCATGCGTAACCGCCTGTCTCGCTCCAAGTCGTATGCAGACGGTGTAACCAACGGTGGCGCAATTCGTAACGGTAACACTGCGCACACCATCGGCGACCACCGCACTGTGATCGCGGACAACTACATCGAAGGCTATCTGGACGTGAAGTGCGCGGCGATCGACGTGTCCCCGTCCTCGAACGATGTGATCATCCGCAACAACGACATCGTGGATTGCGCAGTTGGCTTCCGTCACTACCGTGTGGGCAGCGGCATCAGTCCTGCGCAGCACAGCAACCGTGTGACCGTGGAGTACAACAACTTCACCCGAGTGCTGAACCCGTTCGACGTGGACAACTACGCCAACTCGGCGTTTGACGAGCTGATCATGATCGGCAACAAGTCCATCGAGAACAGCACCCACTTCGTCGTGAAGGGAATCCCGAAAGTCCTGGCGATGGAGAACAAGATTCTGCGCCCAGTCCCGACGCCGGGTGCGTTCGCGTTCGACTTCACCCGCTGCGGCAACGTGAAAGCTTATGGCAACTATGCCGGTGAAGCTGCACGCGGCATCACAGTAACCTCTTGCACATACGCCAAGCTGGTACGGAACATGCTCGGCGATGTGACTGAGAACGTCGCTGTGAATGACGGTGGCGGCAACGTGACGCTGATCAACCTACAAAACACCGATGCGCTTCCTTCTGGTGGCGGTGGTGGGACTGCAAGCCCTGCGAAGTTCACCCGGATCATGGGTACGCTTGCTGACAAGATCACAAGCACTGACCCAGTGAACATCGACAACAACGCCCCGAGCATCGCAAACGGTCTCACAGCGGTTCAGGGCAGCGTGAACGTCGCAATCGGGAGTTTGATCGAGGTCTACGCAATCGCCCCTTACGTGAGCTTGGGCGGGTCTACAGGCCCAGTCACTGCGCATCTTTGGGCGGATGGTGTCCGTGTAGCAACATCGGTCGACCGTCTGACGGCTTCTACTGGCGCAGAGAACACCGGTGGTAAAGACTTCGTGCTGGTCGCCAACTTCATCGCGACTGAAGAAGTCCTGGACTTGATCCTCAAGATCGGCCCGAACAGCAACAGCAACACCATCATGCTCAACAGCAAGTTTGGTGGCGCGAGCCAACCCTACATTCTTGTGAAGGAGTTCCCGCAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
c8ab37de9ab0ac12d7669a46382f850aa13eae498d40357cb17b59001b2c4b5c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7310
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic characterization of two nickie-like bacteriophages that infect the kiwifruit canker phytopathogen Pseudomonas syringae pv. actinidiae Zhang,H., Wu,H., Xia,H., Zhong,C., Li,L. and Zeng,C. 2022 — GenBank