Protein

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Genbank accession
WRM43609.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MTNPTLVTTPFAENGDKNIIPESVGAEPQNATMQAGFPPITQQKISEGGIPPERNDFNGILNLYGQHIVHLNKGLPYEFDQSFADTIGGYPLNARLMLDNGDIVRSTIANNTANPNSDMTGWVRVNSASQIFDESGLSQQQCNNGVESIADLLAIPNPKNGSRVYVKSYHTGLGKGGGYRQYDVTKSSLNNNFTVINGWVLKTDRYSVEQAGARGDGETDDSSAIQNALTVLYPEISNRIQDFGPALWFDSKRYKVSNTVLLPPYANIMGGRAFMIGDAKSNDCFHSARYVNGILTDNTDETDLSNPLFYCRLAGFRYRDFDKSMHLKGWTQQCFVNYIESTACNQHLVTYGCYFLSVGDSTSDGVGLDLEAPKPAYVFEKSYGMLKFSGKIQASSCPIAYEYSQEQQAPTLGNLDAESCGIAIRFKNPIDVNNHGGFLITGCYFENCETILDFVEMGNAVNVVLTYTVKNSFINCPDGALARLNGSQNVKVIFNEEDNKVYQLKNLVVSGASNTILLSDTMKNANYNYTAGIAPNSPLDVTFIDKNIYGANGPTYGHWGQNFQRIVQWDSDSGRVQAKHNDYMRGMIPYTYYGNQGTPQDGIIPFCSHETQQISSSTMRLRVVTAIINNEMVQASFNLKLRSQATLGYMSGRFYNNKVAIDRNDFIGATFRVSVESGVYVLTIDGIASTDASNYSVYGHVKLI
Physico‐chemical
properties
protein length:704 AA
molecular weight: 77602,84220 Da
isoelectric point:5,33698
aromaticity:0,10511
hydropathy:-0,33153

Domains

Domains [InterPro]
DC_0704
ATT
1–169
DC_0704 IPR012334
IPR011050
STR
204–551
IPR011050
DC_1133
RBD
534–704
DC_1133
WRM43609.1
1 704
Architecture
ATT
STR
RBD
ATT 1-169 | STR 201-551 | RBD 552-704
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WRM43609.1
1 704
Domain Start End Length (AA) Confidence
N-terminal 1 221 221 0,9938
Central domain 222 547 327 0,9828
C-terminal 548 704 156 0,9492
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-221
Central
222-547
C-terminal
548-704

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage vB_ApiM_IME-Ap7
[NCBI] 		3096134 No lineage information
Host Acinetobacter pittii
[NCBI] 		48296 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Moraxellales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WRM43609.1 [NCBI]
Genbank nucleotide accession
OR791279.1 [NCBI]
CDS location
range 16369 -> 18483
strand +
CDS
ATGACAAACCCAACTTTAGTAACAACCCCATTCGCCGAAAATGGCGATAAAAATATCATCCCTGAATCAGTTGGCGCTGAACCGCAAAATGCAACTATGCAAGCTGGATTCCCGCCAATTACCCAACAAAAGATTTCTGAGGGTGGTATTCCTCCTGAGCGAAATGATTTTAACGGGATCTTAAATTTATACGGTCAGCACATTGTTCACTTAAACAAGGGCTTGCCTTATGAATTTGATCAATCCTTTGCCGATACTATTGGCGGTTATCCATTAAATGCTCGTTTGATGCTTGATAATGGGGATATTGTTCGATCTACCATTGCGAATAATACAGCCAATCCGAATAGTGATATGACAGGGTGGGTTAGGGTAAATTCCGCTAGTCAGATTTTTGACGAAAGTGGATTGAGTCAGCAGCAATGTAATAATGGTGTCGAGTCTATTGCGGATTTGCTTGCTATCCCTAATCCGAAGAATGGTAGTCGAGTATATGTAAAGTCCTATCACACAGGTCTTGGGAAAGGTGGTGGGTATCGTCAGTATGATGTAACAAAATCCTCTCTAAATAATAATTTTACGGTTATTAATGGGTGGGTTTTAAAAACAGATCGGTATTCTGTTGAGCAAGCAGGTGCAAGAGGAGACGGGGAAACTGATGACTCTTCGGCTATTCAAAATGCCTTGACTGTCTTGTATCCTGAGATCTCAAACCGTATACAAGATTTTGGCCCTGCTCTATGGTTTGACTCGAAGAGATATAAAGTTTCAAACACCGTACTCCTACCTCCTTATGCAAACATAATGGGCGGTAGAGCTTTTATGATCGGTGACGCAAAAAGCAACGATTGCTTTCATAGTGCGCGCTATGTCAATGGTATTCTTACAGATAATACAGATGAAACAGACCTAAGCAACCCTTTGTTTTATTGCCGATTGGCGGGGTTTAGGTATCGAGACTTTGATAAATCAATGCACTTAAAGGGATGGACGCAACAATGTTTTGTTAATTATATCGAATCTACTGCGTGCAATCAGCATTTAGTTACATATGGATGCTACTTTTTAAGCGTTGGTGACTCAACATCTGACGGTGTTGGCTTAGATTTGGAAGCACCAAAGCCTGCTTATGTTTTTGAAAAATCTTATGGCATGTTAAAATTCTCAGGGAAAATTCAAGCTTCGTCTTGTCCGATTGCTTATGAGTATTCGCAAGAGCAACAAGCCCCAACACTAGGAAATCTTGACGCTGAGTCATGCGGCATTGCTATACGATTCAAAAATCCGATTGATGTCAACAACCACGGTGGATTTTTAATAACTGGGTGCTATTTTGAAAACTGCGAAACCATCCTTGACTTTGTTGAAATGGGTAATGCTGTCAATGTTGTCTTAACATACACAGTAAAGAATAGCTTTATTAACTGCCCTGATGGTGCTTTAGCTCGGCTAAACGGCAGTCAAAATGTTAAAGTTATCTTTAATGAAGAAGATAATAAAGTTTATCAGCTTAAAAATCTAGTCGTTTCAGGAGCGTCAAATACTATTCTTCTGAGTGACACGATGAAGAATGCCAATTATAATTATACTGCTGGTATCGCGCCAAATTCTCCACTTGATGTCACATTCATCGATAAAAATATCTATGGTGCTAACGGTCCTACTTATGGACATTGGGGACAAAACTTTCAGAGAATTGTGCAGTGGGATAGCGATTCTGGTCGCGTACAAGCAAAACACAATGATTACATGAGAGGTATGATTCCGTATACCTATTACGGAAATCAAGGCACACCACAGGATGGAATAATCCCTTTTTGCAGCCATGAAACACAACAAATTAGCTCATCCACAATGCGTTTACGGGTTGTTACAGCAATTATCAACAATGAGATGGTACAAGCAAGTTTTAATTTAAAATTACGTTCGCAAGCAACTCTCGGGTATATGAGTGGCCGGTTCTACAATAATAAGGTCGCAATTGATCGTAATGATTTCATAGGTGCTACTTTTAGAGTTTCTGTTGAGAGCGGTGTGTACGTGCTTACTATTGATGGAATAGCATCAACAGACGCGTCTAACTATAGTGTGTACGGTCACGTTAAGTTGATATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
da02656d8daf10c9aa37483405ac2613e3b605f1026cd380e00c86d0cf74ca13
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6957
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Identification and characterization of the capsule depolymerase Dpo12 from phage IME-Ap7 specific to Acinetobacter pittii Wang,R. and Mi,Z. 2024-05-14 — GenBank