Protein

View in Explore
Genbank accession
XKX17579.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MVQLTQPKGMVSKETNKEAIARVFGLKKRQVGYLSTSTVVDSYTILYDEDTQTCWYRGSATGTPTSWTIAGSSLSLSTTIGSFTLVPAYSGDFLKSQIASSSGSSMVGLRQGGTLDSTLVWVTPEMYSAVGDGITDDTTALRNCFADTTNKGLAIVFPANKSYLVSGALDASEVRAIVGNGSTLVYKSSPTASTTLIKMGKQKGALTGLNIAVSQYATTITIPGISTYATIGDLLSLQSSTIRVGASESNYLYGQRCVVKSITGDVVTLMAPILEAFTVTGCTIHRKGNLSVENLNIDLTNLPSTTYLVEGISITGVGISVRNCNIRSNQYGSAGLVIQGCNSQIVGNIVSGFLNANGVSSGGRTGYGIYLDCNNTLVQGNHLEGNKHQLTCASRSYVMSGLLVTRNYATSLGQTTSDAVFDLHANVLGKPVFCNNEIFAQRSAFGIRNGSAEIRENYIYSNRPTDTTPALIGLDEYPTIRSLVVADNTLVCDSNIRLLSFAELTSITNLQIKGNVGTIGSLIDQAMNVSSMITVDILDNRLSGMAKIINMNRRSAASTQTMFSLIQDLKIEGNIFDCTVDDLVTYVFNIYSHANTALADRLEVRNLTVKDNKINSTDTPILLDYLRLTGKTEFTANLLTHTVSGNTTTPPTQTSIGFYNSPIESLIVRSNTMSGRLRWTVREIQPLTSVTYAVESPKITFNVEDNTSLGATFENLWTSASIVFGDSQYKNSHPIGVYGTTLAFLNATSSPGWGASGIVDISENFFQPLSGASVAIGVGFGTHKFIIRNNLMTSAITDASTASVPPSNNITVT
Physico‐chemical
properties
protein length:813 AA
molecular weight: 86842,07960 Da
isoelectric point:6,28636
aromaticity:0,07257
hydropathy:0,03924

Domains

Domains [InterPro]
G3DSA:3.30.2020.50
ATT
2–89
G3DSA:3.30.2020.50 DC_2190 DC_1120
G3DSA:3.30.2020.50
ATT
2–100
G3DSA:3.30.2020.50 IPR012334
IPR011050
STR
130–514
IPR011050
XKX17579.1
1 813
Architecture
ATT
STR
RBD
ATT 2-100 | STR 101-514 | RBD 515-812 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XKX17579.1
1 813
Domain Start End Length (AA) Confidence
N-terminal 1 136 136 0,9308
Central domain 137 802 667 0,9878
C-terminal 803 813 10 0,5192
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-136
Central
137-802
C-terminal
803-813

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage phi1_175008
[NCBI] 		3127744 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XKX17579.1 [NCBI]
Genbank nucleotide accession
PQ360875.1 [NCBI]
CDS location
range 90641 -> 93082
strand +
CDS
ATGGTACAATTGACACAACCAAAAGGCATGGTCTCTAAGGAGACCAATAAAGAAGCAATAGCCCGAGTGTTCGGGCTTAAAAAGAGACAAGTTGGTTATTTATCTACTTCAACCGTAGTAGATTCTTATACAATTTTATATGATGAAGACACACAAACTTGTTGGTATCGTGGGTCAGCAACTGGTACACCTACATCTTGGACTATTGCGGGTAGCTCTCTCAGTTTGAGTACTACTATAGGAAGTTTTACATTAGTTCCTGCCTACAGTGGTGATTTTTTAAAATCTCAGATTGCATCTTCCAGCGGTTCTTCTATGGTAGGATTGAGACAAGGTGGAACTTTAGATTCTACTCTTGTGTGGGTTACACCTGAAATGTATTCTGCGGTAGGTGATGGAATCACGGATGACACTACTGCACTAAGGAATTGTTTTGCAGATACTACTAACAAAGGTTTAGCTATAGTTTTCCCTGCAAATAAAAGTTATCTAGTAAGTGGAGCATTAGATGCTTCAGAGGTACGTGCAATAGTAGGTAATGGATCAACCTTAGTTTATAAATCTAGCCCTACTGCATCTACTACATTAATCAAAATGGGGAAACAGAAAGGGGCTTTAACTGGGCTAAACATAGCTGTAAGTCAGTATGCTACAACTATTACAATACCTGGTATTTCTACATATGCTACAATAGGGGATCTACTTTCTCTGCAATCCTCCACTATCCGAGTAGGAGCATCTGAATCTAATTATCTGTATGGTCAACGTTGCGTTGTTAAATCTATTACAGGGGATGTAGTTACTCTGATGGCTCCTATTTTAGAAGCTTTTACAGTTACAGGATGCACAATACACCGAAAAGGTAACTTGTCAGTAGAAAATCTCAATATAGATCTTACAAACCTTCCATCAACTACATATTTAGTTGAGGGAATATCTATTACTGGAGTAGGTATTAGTGTTCGTAACTGTAATATCCGCTCAAATCAGTATGGTTCTGCTGGTCTGGTGATACAGGGGTGTAATTCTCAAATTGTAGGGAATATTGTTTCTGGTTTTCTAAATGCTAATGGCGTTTCTTCGGGTGGACGTACAGGGTATGGAATCTATTTAGATTGCAATAATACTTTAGTGCAGGGCAACCATTTAGAAGGTAATAAGCATCAGCTAACCTGTGCCTCTCGTAGTTACGTTATGAGTGGATTGTTAGTAACACGTAATTATGCTACTTCACTAGGGCAAACAACTTCAGATGCTGTTTTTGATTTGCATGCAAATGTTTTAGGTAAACCTGTTTTTTGTAATAATGAAATTTTTGCTCAACGATCAGCTTTTGGTATTCGTAATGGCTCTGCTGAAATTAGAGAAAATTATATCTATAGCAATAGACCTACAGATACAACACCAGCCCTAATAGGTCTAGACGAATATCCTACTATAAGATCTCTAGTTGTAGCAGATAATACACTCGTATGTGACAGTAATATAAGACTTTTAAGTTTCGCAGAACTAACTTCAATTACTAATCTTCAAATAAAAGGTAATGTAGGTACTATTGGTAGTCTTATTGACCAAGCAATGAATGTTTCTAGTATGATAACTGTAGATATTCTAGATAACAGATTATCTGGGATGGCTAAAATAATTAATATGAATAGACGTTCTGCTGCATCTACACAAACTATGTTTTCATTAATACAAGACCTTAAAATTGAAGGAAATATTTTTGATTGTACGGTAGATGATCTGGTAACTTATGTGTTTAATATCTATAGTCATGCTAATACAGCGCTTGCAGATAGGCTTGAAGTAAGAAATCTTACTGTTAAAGATAATAAAATTAATTCAACAGATACACCTATTCTTTTGGATTATTTAAGATTGACAGGTAAAACAGAATTTACTGCGAACCTATTAACACATACTGTTTCAGGTAATACAACAACACCACCTACTCAAACATCAATAGGCTTTTATAATAGTCCAATAGAAAGTCTAATAGTCCGTTCAAATACAATGTCCGGTAGACTTCGTTGGACAGTGCGTGAAATTCAACCACTTACTTCGGTAACTTATGCAGTAGAATCACCAAAAATTACGTTTAATGTTGAGGATAATACTTCGTTAGGTGCAACATTTGAGAATTTATGGACTTCTGCTTCTATTGTTTTTGGGGATTCACAGTATAAAAATAGTCACCCTATTGGTGTATATGGTACTACACTGGCCTTCTTAAATGCAACATCCTCACCAGGATGGGGAGCTAGTGGTATAGTGGACATATCAGAGAACTTCTTCCAGCCGTTAAGTGGTGCTTCTGTTGCAATTGGTGTTGGTTTTGGTACTCACAAGTTTATTATTCGTAATAATCTTATGACTTCTGCTATAACGGATGCAAGTACTGCAAGTGTTCCTCCAAGTAATAATATAACAGTAACCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
a37854344c5ee23b82b6083711df108db5b768196d0a81d8a4cba5d310cdd25a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7466
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The complete genome of Klebsiella pneumoniae phage phi1_175008 Li,J., Feng,Y. and Zong,Z. 2023-04-18 — GenBank