Protein

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Genbank accession
YP_006382771.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,85
TF
Evidence RBPdetect2
Probability 0,51
Protein sequence
MSSSLTKLPVNMLVARGRTGGNLKNTGSSVQVAQSDDAEFPVLVSGSVNQLNGTLVLVMSNGEKIEISGLFTANSIVQGPPGPRGFPGNDGRDGTNGRDGEQGATGCQGPPGPRGDTGPEGPRGPQGIQGPPGPKGEPGPRGSDGFVQVYIQSQDPSAQEGSVVKAGALWIKP
Physico‐chemical
properties
protein length:173 AA
molecular weight: 17470,16610 Da
isoelectric point:5,41644
aromaticity:0,03468
hydropathy:-0,52717

Domains

Domains [InterPro]
DC_1453
STR
3–170
DC_1453
PTHR24637
Unmapped
78–145
PTHR24637
IPR008160
STR
94–145
IPR008160
G3DSA:1.20.5.320
STR
115–166
G3DSA:1.20.5.320
YP_006382771.1
1 173
Architecture
STR
STR 3-170 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage Lu11
[NCBI] 		1161927 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas putida
[NCBI] 		303 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_006382771.1 [NCBI]
Genbank nucleotide accession
NC_017972.1 [NCBI]
CDS location
range 189445 -> 189966
strand +
CDS
ATGTCTAGTTCTTTAACGAAATTGCCAGTCAATATGCTGGTCGCTCGCGGACGTACAGGCGGAAACCTAAAAAATACAGGTTCCTCGGTACAGGTTGCGCAAAGCGACGATGCTGAATTTCCGGTGCTTGTTTCGGGATCGGTGAACCAGTTAAATGGTACATTGGTTCTAGTAATGTCCAACGGAGAAAAGATTGAGATTAGCGGATTGTTTACCGCAAACTCAATTGTGCAAGGCCCGCCCGGTCCGCGTGGTTTTCCCGGTAATGACGGGCGCGACGGAACAAACGGGCGCGATGGTGAACAGGGTGCAACAGGTTGCCAAGGCCCACCCGGTCCTCGCGGTGATACAGGCCCCGAAGGTCCACGCGGTCCGCAAGGTATCCAAGGCCCGCCCGGTCCAAAAGGTGAACCGGGACCGCGTGGTTCTGATGGCTTTGTGCAGGTTTATATTCAATCGCAAGACCCCAGTGCGCAGGAAGGTAGCGTAGTAAAAGCCGGTGCGCTCTGGATAAAGCCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b6626bfd063f115bb2ddfbf67f1b3c5ccd3e917ff610a5e11abd3e95ddf38a37
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7251
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50