Protein

View in Explore
Genbank accession
AIX28532.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,87
TSP
Evidence RBPdetect2
Probability 0,59
Protein sequence
MAIVFPASPTLNDTFTEGSITYKCVQVNPNKWIGLGVTPADRLVEGSNKLEIDGSNNLVWAGNNVGIGIDNPSGNLHVGSGSGQAPANSAKNIVIDGSGAVGMGILFGTSANTAYGNIYWGNSTDGSADGRITYFGSTYATAGDRQAMVFRTAGSEKLRITSDGHLKIPYQPRFLAYGTSSSPQTTSGSFTWDTFTTTRFNVGGHFSTTTKVFTAPTAGCYAFGSNCRIDSGDIGYFRLILSVNGSSDDNQQGHSIRNTDTGSAAFHSQSVTALYELNAGDTVKVLVEANSDSSWVMQSESQFWGYLVG
Physico‐chemical
properties
protein length:309 AA
molecular weight: 32596,43010 Da
isoelectric point:5,28258
aromaticity:0,10356
hydropathy:-0,21650

Domains

Domains [InterPro]
DC_0963
STR
35–306
DC_0963
IPR001073
RBD
169–309
IPR001073
IPR008983
RBD
171–309
IPR008983
IPR008983
RBD
171–308
IPR008983
IPR001073
RBD
185–308
IPR001073
AIX28532.1
1 309
Architecture
STR
STR 35-309
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AIX28532.1
1 309
Domain Start End Length (AA) Confidence
N-terminal 1 24 24 0,6705
Central domain 25 223 200 0,0337
C-terminal 224 309 85 0,9963
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-24
Central
25-223
C-terminal
224-309

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage ACG-2014j
[NCBI] 		1493514 Uroviricota > Caudoviricetes > Pantevenvirales > Potamoivirus > Potamoivirus tusconj
Host Synechococcus sp. WH 7803
[NCBI] 		32051 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AIX28532.1 [NCBI]
Genbank nucleotide accession
KJ019089 [NCBI]
CDS location
range 174210 -> 175139
strand +
CDS
ATGGCAATTGTATTTCCAGCAAGTCCCACTTTAAATGATACCTTTACTGAAGGATCTATCACATACAAATGTGTTCAGGTAAATCCAAATAAGTGGATTGGACTTGGTGTTACTCCTGCTGATAGATTAGTTGAAGGTAGTAATAAGTTAGAGATTGATGGTAGTAATAATCTAGTTTGGGCTGGTAATAATGTTGGCATAGGAATTGATAATCCATCAGGTAATCTTCATGTTGGTAGTGGATCGGGTCAAGCACCTGCAAACTCTGCAAAAAATATAGTTATTGATGGTAGTGGTGCCGTTGGTATGGGCATCTTATTTGGAACTTCCGCGAATACAGCATATGGAAATATCTACTGGGGAAATAGTACTGATGGTAGTGCTGATGGAAGAATAACATACTTTGGATCTACCTATGCAACAGCAGGTGACCGTCAGGCGATGGTGTTTAGAACTGCTGGATCAGAAAAACTTCGTATAACTTCTGATGGTCATCTAAAGATACCATATCAACCAAGATTTCTTGCTTACGGAACTTCATCATCCCCTCAGACCACTAGTGGTAGTTTTACATGGGATACATTTACTACGACAAGATTTAATGTAGGTGGTCATTTTTCTACAACAACGAAAGTGTTTACTGCACCAACTGCTGGATGTTATGCTTTTGGATCTAATTGTAGAATTGATAGTGGTGACATAGGTTATTTTCGCTTAATATTATCAGTTAATGGTAGTAGTGATGATAATCAGCAGGGACATAGTATTAGAAATACAGATACAGGAAGTGCTGCCTTTCACTCCCAATCAGTAACTGCATTGTATGAGTTAAACGCAGGTGATACTGTAAAAGTTCTTGTTGAGGCTAATAGTGATTCTTCTTGGGTGATGCAATCTGAATCTCAATTCTGGGGATACTTGGTAGGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
836fe18645bbf93447bed20397dd75920adedb46674330e8047c84cf21c73f76
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7644
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Ecological redundancy of diverse viral populations within a natural community Gregory,A.C., LaButti,K., Copeland,A., Woyke,T. and Sullivan,M.B. 2015-03-20 — GenBank