Protein

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Genbank accession
QCW22875.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,87
TF
Evidence RBPdetect2
Probability 0,71
Protein sequence
MAAPKVKFKRSSVAGKIPALSNLETGELALNTYDGKLFLKVDTGGIGIGTTVSTVNPWTENYGASGISYGGQVDITGVTTFRSDVNFDGGIVSAGIVTALRYESTQGGISNFYAGNEAGSNAGSGAVQNTGVGQNALQDLTTGDYNSSFGASSGLNITEGYSNVTIGAYSGDTLTTGYENTLVGTNAGGTLDSGRIRNTFIGANSGYAANNADYGTFVGHSAGYNCEGDYNVALGYQAGYNSSSSYAINIGAYAGTNSSNSLYNISIGYVAGNDLEGTGNIALGYETLRYHNGGGDYNIALGYQAKRLDGSDSSYNVAIGYQAMYGASDTTGDYNIAIGNQAGHDITSGSGNILLGSQAGDSITSGSSNVVIVGGEGSTIDVDSATEDGQLVIGYGSTSWITGNKDREVTIAGVATVYGATGIISATKYYGDGSSLTGISAGAGGTENVSSNTTISGIITASSQFYPPTLTTSERDALTVTQGALIFNTTENKVQMYLGSEWKSLAFELNTYTSIGI
Physico‐chemical
properties
protein length:517 AA
molecular weight: 52751,49240 Da
isoelectric point:4,28421
aromaticity:0,09284
hydropathy:-0,14990

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QCW22875.1
1 517
Domain Start End Length (AA) Confidence
N-terminal 1 75 75 0,5106
Central domain 76 401 327 0,9190
C-terminal 402 517 115 0,8242
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-75
Central
76-401
C-terminal
402-517

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-B05
[NCBI] 		2484637 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp. MW02
[NCBI] 		1620844 Cyanobacteriota > Cyanophyceae > Synechococcales > Synechococcaceae > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QCW22875.1 [NCBI]
Genbank nucleotide accession
MK799832.1 [NCBI]
CDS location
range 45236 -> 46789
strand +
CDS
ATGGCGGCTCCAAAGGTAAAGTTTAAGCGCTCATCTGTAGCGGGAAAGATTCCTGCACTCTCGAATCTGGAGACGGGCGAATTAGCACTTAATACTTACGACGGTAAATTATTTTTAAAAGTAGATACTGGTGGTATTGGTATTGGAACCACCGTATCTACTGTTAATCCCTGGACGGAAAACTATGGTGCGTCAGGGATAAGTTATGGTGGTCAAGTAGATATAACTGGTGTTACCACATTCAGAAGTGATGTAAATTTTGATGGAGGAATTGTCTCTGCAGGAATTGTCACTGCACTTAGATATGAATCCACACAGGGAGGTATAAGTAATTTCTATGCAGGTAACGAAGCAGGAAGTAATGCTGGATCAGGTGCCGTTCAAAACACTGGTGTTGGTCAAAACGCATTACAAGATCTAACCACTGGAGACTATAATAGTTCCTTTGGAGCATCATCTGGTTTAAACATTACTGAAGGTTATAGTAACGTTACTATCGGTGCATATTCTGGTGACACTTTGACAACAGGTTATGAAAATACACTTGTTGGAACTAATGCTGGAGGAACTTTAGACTCTGGTAGAATAAGAAATACTTTTATTGGTGCAAATTCTGGATATGCAGCAAATAATGCTGATTATGGTACTTTTGTAGGACACTCTGCTGGTTACAATTGTGAAGGTGACTATAATGTTGCCCTTGGATATCAAGCAGGTTATAATTCATCATCAAGTTATGCAATCAATATTGGTGCATATGCAGGCACTAATTCTTCAAATAGTTTATATAATATTTCTATTGGATATGTTGCTGGAAATGATTTAGAGGGAACTGGTAATATTGCTCTTGGTTATGAGACTTTAAGATATCATAATGGGGGTGGTGATTATAATATTGCCTTAGGATATCAAGCCAAAAGACTTGATGGATCTGATAGTAGTTATAATGTTGCTATCGGTTATCAGGCAATGTATGGTGCTAGTGATACGACTGGTGACTACAATATTGCTATTGGTAATCAGGCAGGACATGATATTACTTCAGGAAGTGGTAATATTTTATTAGGAAGTCAGGCGGGAGATTCTATAACCTCGGGATCTAGTAATGTTGTTATTGTTGGTGGAGAGGGATCGACAATTGATGTTGATAGTGCCACGGAAGATGGACAACTTGTCATAGGTTATGGTTCAACTTCATGGATAACTGGAAATAAAGATAGAGAAGTAACGATCGCTGGAGTTGCAACGGTATATGGTGCTACTGGGATCATAAGTGCAACAAAATATTATGGTGATGGTTCAAGTCTAACTGGTATCTCTGCTGGTGCAGGTGGTACTGAAAATGTATCATCAAATACTACTATCTCAGGAATTATTACTGCATCTTCACAGTTCTATCCACCAACACTAACAACGTCCGAGAGAGATGCATTAACTGTAACTCAAGGTGCATTGATTTTTAATACGACCGAGAACAAAGTACAGATGTATCTTGGTTCTGAATGGAAATCATTAGCATTCGAACTGAATACCTATACATCAATCGGTATCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
8c86494dee023c872509bdd0914f6a984c3f4b6fa49ee646505c1fd7b39f7b90
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7939
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Isolation and Genome Sequence of a Novel Cyanophage S-B05 from the Bohai Sea, China Jiang,T. 2020-10 — GenBank