Protein

View in Explore
Genbank accession
WBF04897.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,87
Protein sequence
MVKSVSVGETIKSVTDYQQAIDDGANPNEVTTDQVGTYTKDQVDAKLALIAGSGDLPLSQFGDLGFIPPNISVKYEGAATYNPGIAYNVEADGSRNYLRAGCDGSQYGVYLCKYNVNALGNVEGYSPLANIWQPSYLPDTQRPIAVINGLETQVALLVRDSANNRSFFAVSERTGTLDPAAHATGLKGIIGSTWTPSLSCVLAHKGSLYHFHYNLNDTQGVALSIVVDKMETYTGNPASAPTQLLGWTGKDIHGNQFNSWDAIAVSKYYITGVPGLGNDSVYFEWTDNLPATAPMIQPPSIHATFLSGDTYRLFFVHEQWVSLASGASIRVLVSRQVDVNLITRTFTWQANSLGPTQAVGDTNANSIVINGLASYPDSVKYGLSGLGNVRPSFGRCPRTKEVLTQTNSVVYGTSQQQYLGVVPDAVWLDPKQRNFSGKPPYAYKGNYPTPLTVSIRIPKVLAKDKLRVSFDGGQANITGINYNDTTVFNYPDGTTSTWALDTGREATGPMETSRMLTEIDVNFNVRLSNTFTRDAPSGSSNLDQYGIGTNDTTVTAAVFDAIEASARAELGGVGTIRSMHTVVAIPRILTKKLTNKFVSLTLIIMGDGAGFNFLTMGDKTGWSGGTLSAVSISQKRLSEQVATGVISVVNVGAGGIGLTIAEQTDYTFVGGSIPFSTSYPGNSGHPSQAVGFNDSDGAMFAIRDYQGHGYANQDELFALPSSLGVVAMNTSVDSLFVQTTLTVMSYGRTKTGVLSGATTKAKVIATQAVKGSWNVYFSEEVYCQIAGIKGRAPKKTVNLTSVIADPSNKTFYIYVQLTDGQFDYLVTNGPQSADRNRLLVGTVATDTTHVVSVTVFKVVGIDGFSLSFDKAPFAIPASSGNPTTTGALNWTFP
Physico‐chemical
properties
protein length:893 AA
molecular weight: 95385,80610 Da
isoelectric point:5,83307
aromaticity:0,09518
hydropathy:-0,09754

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WBF04897.1
1 893
Domain Start End Length (AA) Confidence
N-terminal 1 348 348 0,2018
Central domain 349 556 209 0,8558
C-terminal 557 893 336 0,5029
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-348
Central
349-556
C-terminal
557-893

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage vB_Ea277G
[NCBI] 		3016906 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Erwinia amylovora
[NCBI] 		552 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WBF04897.1 [NCBI]
Genbank nucleotide accession
OP991903 [NCBI]
CDS location
range 193334 -> 196015
strand +
CDS
ATGGTAAAATCGGTGAGTGTTGGTGAGACCATCAAATCGGTGACCGATTACCAGCAGGCCATTGATGACGGGGCAAACCCAAACGAGGTTACCACGGACCAAGTCGGGACGTACACCAAAGACCAGGTGGATGCGAAACTCGCCCTGATAGCAGGTTCCGGTGACCTTCCGTTGTCCCAGTTCGGCGACCTGGGGTTCATCCCGCCAAATATCTCGGTGAAGTACGAAGGGGCGGCGACTTACAACCCAGGGATTGCGTACAACGTCGAAGCAGACGGGTCACGTAACTATCTTCGGGCAGGATGCGACGGTTCGCAGTACGGAGTTTACCTCTGTAAGTACAATGTCAATGCGTTAGGGAATGTCGAAGGATACAGCCCGTTAGCGAACATCTGGCAACCGTCGTACCTACCGGACACCCAACGTCCTATCGCCGTGATAAACGGTCTGGAGACACAGGTAGCATTACTGGTCAGGGATAGCGCAAACAACCGTTCTTTCTTTGCGGTCAGTGAACGCACGGGGACACTGGACCCGGCTGCCCACGCGACTGGACTGAAAGGGATTATCGGTAGCACCTGGACCCCGAGCCTTTCTTGCGTACTGGCGCACAAGGGTAGTCTCTACCATTTCCATTACAACCTCAACGACACGCAAGGTGTGGCCTTGTCTATCGTGGTGGATAAAATGGAAACGTACACGGGCAACCCAGCAAGTGCTCCAACTCAGCTCTTAGGTTGGACGGGCAAAGACATCCACGGCAACCAGTTCAACAGCTGGGATGCGATTGCGGTGTCAAAGTACTACATCACTGGGGTACCTGGTTTAGGGAATGACTCGGTCTATTTCGAATGGACGGATAACCTCCCGGCGACCGCGCCGATGATTCAGCCGCCGAGTATCCACGCCACATTCTTGTCGGGTGATACGTATCGACTTTTCTTTGTCCATGAACAATGGGTGAGTTTGGCGAGCGGGGCCTCTATCCGCGTTCTGGTCAGTCGTCAAGTGGATGTTAACCTGATAACGAGGACCTTTACCTGGCAAGCTAACTCGTTGGGTCCGACACAAGCGGTCGGGGACACCAACGCCAACAGCATCGTTATCAATGGATTAGCTTCTTACCCGGATTCCGTTAAGTACGGTCTTTCGGGACTGGGTAACGTCAGGCCGTCGTTTGGTCGGTGCCCGCGGACGAAAGAAGTGTTGACGCAAACCAACTCTGTGGTCTACGGGACTTCCCAACAGCAGTACCTTGGGGTGGTTCCTGATGCGGTGTGGTTGGACCCGAAACAACGCAACTTCAGTGGGAAACCACCGTATGCGTATAAAGGTAACTATCCTACGCCCCTGACGGTGAGTATCCGTATCCCGAAAGTGTTAGCGAAGGATAAACTCCGCGTCTCTTTCGATGGTGGGCAGGCGAACATCACCGGTATCAACTACAACGATACCACGGTGTTCAACTACCCGGACGGCACCACCTCGACGTGGGCATTGGACACGGGAAGGGAAGCGACCGGGCCGATGGAAACTTCCCGGATGTTAACCGAAATTGATGTTAACTTTAATGTCCGGTTATCCAATACATTTACTCGTGACGCCCCCAGTGGGTCTTCTAACCTTGACCAATACGGGATAGGGACGAATGATACTACAGTGACGGCGGCTGTCTTCGATGCGATTGAAGCGTCTGCCCGCGCTGAGTTAGGCGGGGTAGGGACAATTCGCAGTATGCACACGGTGGTTGCTATACCGCGTATCCTGACGAAGAAGCTGACCAACAAGTTCGTGTCACTGACTTTGATTATCATGGGCGACGGGGCAGGTTTCAATTTCCTGACAATGGGGGATAAAACCGGATGGTCCGGCGGGACGTTGTCTGCGGTGTCGATTTCCCAAAAACGGTTGTCTGAACAAGTCGCTACGGGCGTTATCTCCGTGGTAAATGTGGGTGCCGGTGGTATCGGGCTGACCATTGCTGAACAAACGGACTACACCTTTGTGGGCGGGTCTATTCCGTTCTCCACCAGTTATCCGGGGAACTCTGGACATCCGTCTCAGGCGGTGGGCTTCAACGACAGCGACGGGGCGATGTTCGCTATTCGCGATTACCAAGGACATGGGTACGCGAACCAGGACGAACTCTTTGCTCTCCCCTCTTCGTTAGGGGTAGTCGCGATGAACACCAGTGTCGACAGTTTATTCGTACAAACCACCCTGACGGTGATGTCGTACGGACGAACCAAGACCGGTGTGTTGTCAGGGGCAACCACCAAAGCCAAGGTAATTGCAACACAGGCAGTGAAGGGGAGCTGGAACGTATACTTCTCAGAAGAGGTGTATTGTCAGATTGCGGGCATCAAAGGTCGTGCGCCGAAGAAAACCGTCAATTTGACCAGCGTAATAGCCGACCCCAGTAACAAAACCTTTTACATTTACGTTCAGTTGACCGATGGACAGTTTGACTACCTGGTCACCAACGGTCCACAAAGCGCTGACCGGAACCGATTACTCGTAGGGACTGTCGCTACCGACACGACGCACGTTGTCAGTGTAACAGTCTTTAAAGTGGTAGGGATTGACGGCTTCTCCTTGTCGTTCGATAAGGCTCCGTTCGCTATCCCGGCCTCGAGCGGTAACCCGACAACCACCGGTGCTTTAAACTGGACCTTCCCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5b47af2ec0d8845f06300d10cd0fb9a62314c6e3181d5ab105cc0a59c52e1fd5
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3456
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequences of Erwinia Amylovora phage vB_Ea277G Renteria-Soto,D.L., Romo-Chacon,A., Rios-Velasco,C., Olivas,G.I. and Berlanga-Reyes,D.I. 2023-07-17 — GenBank